Factsheet for Solyc01g110280.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
vacuole 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008058	Potato	plastid	95.33	95.33
Solyc10g054110.1.1	Tomato	plastid	47.94	71.2
CDY65815	Canola	plasma membrane	55.66	70.29
Solyc10g054100.1.1	Tomato	endoplasmic reticulum, vacuole	8.08	67.16
VIT_03s0038g00410.t01	Wine grape	cytosol, peroxisome, plasma membrane	60.32	66.01
GSMUA_Achr1P16310_001	Banana	plasma membrane	49.73	65.33
OQU84246	Sorghum	plasma membrane	48.29	63.44
CDX83192	Canola	plastid	58.71	61.01
CDX82020	Canola	plastid	60.68	60.9
Bra031182.1-P	Field mustard	plastid	59.78	60.33
KRH29368	Soybean	plastid	58.17	59.34
KRH29367	Soybean	plastid	57.81	58.76
AT2G21340.1	Thale cress	plastid	58.89	58.68
VIT_03s0038g00430.t01	Wine grape	plastid	59.07	58.02
Bra000583.1-P	Field mustard	plastid	52.78	57.09
HORVU6Hr1G012070.9	Barley	peroxisome, plastid	50.99	56.24
Os02t0122200-00	Rice	plastid, vacuole	47.76	55.77
CDY41956	Canola	mitochondrion	53.5	55.6
CDY42600	Canola	mitochondrion	53.5	55.6
Bra011880.1-P	Field mustard	mitochondrion	53.5	55.39
AT4G39030.1	Thale cress	mitochondrion	53.14	54.51
TraesCS6B01G090100.1	Wheat	plasma membrane	49.91	54.19
TraesCS6A01G066900.3	Wheat	plasma membrane, plastid, vacuole	51.53	53.75
Zm00001d015060_P001	Maize	plastid	52.42	53.58
TraesCSU01G117300.1	Wheat	plastid	51.35	53.56
KRH24389	Soybean	extracellular	8.62	40.34
Solyc10g085340.1.1	Tomato	golgi, plasma membrane	12.57	22.65
Solyc11g065820.1.1	Tomato	cytosol, plasma membrane, vacuole	19.39	21.18
Solyc01g112090.2.1	Tomato	plastid	21.54	19.74
Solyc01g087150.2.1	Tomato	plasma membrane	18.49	19.62
Solyc01g008420.2.1	Tomato	plasma membrane	18.49	19.22
Solyc02g061760.2.1	Tomato	plastid	18.67	18.87
Solyc10g085330.1.1	Tomato	plastid	8.08	18.29

Protein Annotations

MapMan:11.8.4.1	MapMan:24.2.4.1.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	UniProt:K4B3P1	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF9
EnsemblPlantsGene:Solyc01g110280.2	EnsemblPlants:Solyc01g110280.2.1	TMHMM:TMhelix	UniParc:UPI0002768F9A	:	:

Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:K4B3P1]

Coordinates

chr1:-:96994113..97000900

Molecular Weight (calculated)

60753.7 Da

IEP (calculated)

8.207

GRAVY (calculated)

0.507

Length

557 amino acids

Sequence
(BLAST)

001: MNLETLTCKS HIIPIEIPKF NLNFHVDFSS TRRRTCRVKS LTRIHNHRKR IITACVNRSQ EVPVNLENSR SNLNSCTNNE EQVEAVAIRE EIPVVDSNAK
101: GEFSGNESIW AQVVEIVKFS GPAVGLWLCG PLMSLIDTAV IGQGSSIELA ALGPGTVFCD NTSYVFMFLS IATSNLVATA LAKQDKDEVQ HQISILLFIG
201: LACGIVMLIC TRLFGTWGIT AFTGANNMEI INAANTYVQI RGLAWPAMLV GWVAQSASLG MKDSWGPLKA LAVATAINGI GDIVLCRFFG YGIAGAAWAT
301: MVSQVVAAYM MIAALSKKGY NGFALSVPSF DEVLQIFTLA APVFLTMMSK VAFYSLLVYY ATSMGTNTAA AHQVMLQLFS IFAVWGEPLS QTAQSFMPEL
401: LYGVNRNLSK ARMLLKSLLI IGASNGLILG SAGVSISWFF PQMFSSDALV IQEMHKVLLQ LFLTLWVSPC VHSLEGTLLA GRDLKFISIS MTTIFGFASL
501: LVMLFSSKGF GLSGCWFALV AFQWTRFLVA LRRLTLADGI LYLEGSVHDE LQKLKAT

Best Arabidopsis Sequence Match ( AT2G21340.1 )
(BLAST)

001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTAFTGVKN ADIVPAANKY VQIRGLAWPA VLIGWVAQSA SLGMKDSWGP LKALAVASAI NGVGDVVLCT FLGYGIAGAA
301: WATMVSQVVA AYMMMDALNK KGYSAFSFCV PSPSELLTIF GLAAPVFITM MSKVLFYTLL VYFATSMGTN IIAAHQVMLQ IYTMSTVWGE PLSQTAQSFM
401: PELLFGINRN LPKARVLLKS LVIIGATLGI VVGTIGTAVP WLFPGIFTRD KVVTSEMHKV IIPYFLALSI TPSTHSLEGT LLAGRDLRYI SLSMTGCLAV
501: AGLLLMLLSN GGFGLRGCWY ALVGFQWARF SLSLFRLLSR DGVLYSEDTS RYAEKVKAA

Arabidopsis Description

DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.