Factsheet for VIT_03s0038g00410.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
vacuole 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65815	Canola	plasma membrane	65.03	75.06
GSMUA_Achr1P16310_001	Banana	plasma membrane	59.33	71.23
OQU84246	Sorghum	plasma membrane	54.81	65.8
VIT_03s0038g00430.t01	Wine grape	plastid	71.91	64.55
CDX83192	Canola	plastid	67.58	64.18
KRH29367	Soybean	plastid	68.37	63.5
CDX82020	Canola	plastid	68.96	63.24
Bra031182.1-P	Field mustard	plastid	68.57	63.22
KRH29368	Soybean	plastid	67.58	63.0
AT2G21340.1	Thale cress	plastid	68.57	62.43
PGSC0003DMT400008778	Potato	plastid	65.03	60.85
Bra000583.1-P	Field mustard	plastid	61.1	60.39
Solyc01g110280.2.1	Tomato	plastid	66.01	60.32
HORVU6Hr1G012070.9	Barley	peroxisome, plastid	59.53	60.0
PGSC0003DMT400008058	Potato	plastid	65.62	59.96
Bra011880.1-P	Field mustard	mitochondrion	61.69	58.36
Os02t0122200-00	Rice	plastid, vacuole	54.62	58.28
CDY41956	Canola	mitochondrion	61.3	58.21
PGSC0003DMT400008050	Potato	mitochondrion, plasma membrane, plastid, vacuole	54.62	58.16
CDY42600	Canola	mitochondrion	61.1	58.02
AT4G39030.1	Thale cress	mitochondrion	61.49	57.64
TraesCS6A01G066900.3	Wheat	plasma membrane, plastid, vacuole	59.73	56.93
TraesCS6B01G090100.1	Wheat	plasma membrane	57.37	56.92
TraesCSU01G117300.1	Wheat	plastid	59.53	56.74
Zm00001d015060_P001	Maize	plastid	58.94	55.05
KRH24389	Soybean	extracellular	11.98	51.26
VIT_08s0007g08200.t01	Wine grape	plasma membrane	21.81	21.89
VIT_06s0004g02140.t01	Wine grape	cytosol, plasma membrane, vacuole	21.81	21.64
VIT_13s0064g00940.t01	Wine grape	plasma membrane	20.83	19.38
VIT_03s0038g03200.t01	Wine grape	plastid	22.59	19.04
VIT_13s0064g00930.t01	Wine grape	plasma membrane	20.04	19.03
VIT_08s0058g00510.t01	Wine grape	plastid	20.83	19.0
VIT_13s0019g05200.t01	Wine grape	cytosol	3.14	18.6

Protein Annotations

EntrezGene:100243426	wikigene:100243426	MapMan:11.8.4.1	MapMan:24.2.4.1.2	ProteinID:CCB60713	ProteinID:CCB60713.1
UniProt:F6I197	EMBL:FN596508	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EntrezGene:LOC100243426	wikigene:LOC100243426	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893
PANTHER:PTHR42893:SF9	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI000210A7EE	ArrayExpress:VIT_03s0038g00410	EnsemblPlantsGene:VIT_03s0038g00410
EnsemblPlants:VIT_03s0038g00410.t01	RefSeq:XP_002274783	RefSeq:XP_002274783.1	SEG:seg	:	:

Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F6I197]

Coordinates

chr3:-:380470..396792

Molecular Weight (calculated)

54905.6 Da

IEP (calculated)

5.606

GRAVY (calculated)

0.615

Length

509 amino acids

Sequence
(BLAST)

001: MNRGSRFAIG CIGSSEVVGD GVEFVAGNEE NVGSVSLLEE DEVEVEVVGV GKQEFGVNQS IWEQMKEIMM FTGPATGLWI CGPLMSLIDT AVIGQGSSVE
101: LAALGPGTVV CDYMSYVFMF LSIATSNMVA TSLARQDKNE VQHQISTLLF VGFTCGVLML LFTKFLGAWA LTVFTGPKNA HIVPAANVYV QIRGLAWPAV
201: LVGWVAQSAS LGMKDSWGPL KALAVASAIN GIGDIVLCSF LGYGIAGAAW ATMVSQVIAG YMMIEALNKK GYNAFAFSVP SLDEFVQILG LAAPVFVTMM
301: SKVAFYSFLI YFATSMGTHT LAAHQVMSQL YSMCTVWGEP LSQTAQSFMP ELIYGVNRNL AKARMLLKSL LIMGALVGLT LGTIAIAIPW LFPNIFTHDG
401: EVIHEMHKVL IPYFLALVVT PSTHSLEGTL LAGRELRFIS LSMSGCFSLG GLLLLFVYSR GYGLSGCWFG LVAFQWARFF LALQRLFSPN GILYSEDLNQ
501: SDLGKLKAV

Best Arabidopsis Sequence Match ( AT2G21340.1 )
(BLAST)

001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTAFTGVKN ADIVPAANKY VQIRGLAWPA VLIGWVAQSA SLGMKDSWGP LKALAVASAI NGVGDVVLCT FLGYGIAGAA
301: WATMVSQVVA AYMMMDALNK KGYSAFSFCV PSPSELLTIF GLAAPVFITM MSKVLFYTLL VYFATSMGTN IIAAHQVMLQ IYTMSTVWGE PLSQTAQSFM
401: PELLFGINRN LPKARVLLKS LVIIGATLGI VVGTIGTAVP WLFPGIFTRD KVVTSEMHKV IIPYFLALSI TPSTHSLEGT LLAGRDLRYI SLSMTGCLAV
501: AGLLLMLLSN GGFGLRGCWY ALVGFQWARF SLSLFRLLSR DGVLYSEDTS RYAEKVKAA

Arabidopsis Description

DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.