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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • golgi 3
  • plasma membrane 5
  • endoplasmic reticulum 3
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83192 Canola plastid 98.41 80.97
CDX82020 Canola plastid 90.93 72.25
AT2G21340.1 Thale cress plastid 90.7 71.56
GSMUA_Achr1P16310_001 Banana plasma membrane 65.53 68.16
VIT_03s0038g00410.t01 Wine grape cytosol, peroxisome, plasma membrane 75.06 65.03
OQU84246 Sorghum plasma membrane 60.54 62.97
PGSC0003DMT400008778 Potato plastid 68.93 55.88
HORVU6Hr1G012070.9 Barley peroxisome, plastid 63.95 55.84
VIT_03s0038g00430.t01 Wine grape plastid 71.66 55.73
Solyc01g110280.2.1 Tomato plastid 70.29 55.66
PGSC0003DMT400008058 Potato plastid 70.07 55.48
CDY41956 Canola mitochondrion 67.12 55.22
CDY42600 Canola mitochondrion 66.89 55.04
PGSC0003DMT400008050 Potato mitochondrion, plasma membrane, plastid, vacuole 59.64 55.02
Os02t0122200-00 Rice plastid, vacuole 59.18 54.72
TraesCS6B01G090100.1 Wheat plasma membrane 62.13 53.41
TraesCS6A01G066900.3 Wheat plasma membrane, plastid, vacuole 64.17 53.0
TraesCSU01G117300.1 Wheat plastid 63.95 52.81
Zm00001d015060_P001 Maize plastid 63.49 51.38
KRH24389 Soybean extracellular 13.15 48.74
CDX74015 Canola plasma membrane 25.4 21.88
CDY07959 Canola plasma membrane 25.62 21.28
CDX74014 Canola plasma membrane 25.4 21.17
CDY07957 Canola plasma membrane 25.4 21.17
CDY65471 Canola plasma membrane 24.72 20.96
CDY03629 Canola plasma membrane 24.72 20.96
CDY29628 Canola plasma membrane 24.26 20.74
CDY66973 Canola plasma membrane 24.26 20.7
CDY01220 Canola plasma membrane 24.26 20.7
CDY22150 Canola cytosol, plasma membrane, vacuole 24.72 20.64
CDY28001 Canola plasma membrane 24.72 20.57
CDY35980 Canola plasma membrane 24.72 20.34
CDY07737 Canola plastid 22.9 18.95
CDX74016 Canola extracellular, plasma membrane, vacuole 5.9 18.84
CDY63154 Canola plastid 21.09 18.2
CDY27977 Canola endoplasmic reticulum, extracellular, plasma membrane 7.94 17.07
CDY27978 Canola plasma membrane 16.33 15.72
CDY12082 Canola plastid 23.36 13.1
CDX90273 Canola plastid 23.36 13.09
Protein Annotations
MapMan:11.8.4.1MapMan:24.2.4.1.2GO:A0A078JH70UniProt:A0A078JH70EnsemblPlants:CDY65815ProteinID:CDY65815
ProteinID:CDY65815.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855
GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00048288001InterPro:MATE_famPFAM:PF01554PANTHER:PTHR42893PANTHER:PTHR42893:SF9TIGRFAMs:TIGR00797
TMHMM:TMhelixUniParc:UPI0004EEE9FCSEG:seg:::
Description
BnaCnng48780DBnaCnng48780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JH70]
Coordinates
chrLK034963:+:6713..9692
Molecular Weight (calculated)
46872.4 Da
IEP (calculated)
8.368
GRAVY (calculated)
0.782
Length
441 amino acids
Sequence
(BLAST)
001: MKEIVMFTGP AAGLWICGPL MSLIDTAVIG QGSSVELAAL GPATVVCDYL SYTFMFLSVA TSNLVATSLA RGDKDEVQHQ ISILLFIGLA CGVVMMAFTR
101: LFGSGVLAGA KNAEIVPAAN TYVQIRGLAW PAVLIGWVAQ SASLGMKDSW GPLKALAVAS AINGAGDLVL CTFLGYGIAG AAWATMVSQV VAAYMMMDAL
201: NKKGYNAFSL CVPSPSELFT IIGLAAPVFM TMMSKVLFYS LLVYFATSMG TSVIAAHQVM LQTYNICTIL GEPLSQTAQS FMPELLFGIN RNLPKARMLL
301: KSLVIIGATL GIVVGTIGTA IPWLFPTIFT HDKVVTLEMH KVIIPYFLAL SITPSTLSLE GTLLAGRDLR YISLSTAGCL AVAGLLLMLL SNGGFGLRGC
401: WFALVGFQWA RFSLALVRLL SRDGVLYSED TSRYAEKVKA A
Best Arabidopsis Sequence Match ( AT2G21340.2 )
(BLAST)
001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTGVKNADI VPAANKYVQI RGLAWPAVLI GWVAQSASLG MKDSWGPLKA LAVASAINGV GDVVLCTFLG YGIAGAAWAT
301: MVSQVVAAYM MMDALNKKGY SAFSFCVPSP SELLTIFGLA APVFITMMSK VLFYTLLVYF ATSMGTNIIA AHQVMLQIYT MSTVWGEPLS QTAQSFMPEL
401: LFGINRNLPK ARVLLKSLVI IGATLGIVVG TIGTAVPWLF PGIFTRDKVV TSEMHKVIIP YFLALSITPS THSLEGTLLA GRDLRYISLS MTGCLAVAGL
501: LLMLLSNGGF GLRGCWYALV GFQWARFSLS LFRLLSRDGV LYSEDTSRYA EKVKAA
Arabidopsis Description
DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.