CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010745.1-P	Field mustard	plastid	67.34	98.7
CDY12082	Canola	plastid	96.32	96.44
AT4G38380.2	Thale cress	plastid	61.75	86.79
GSMUA_AchrUn_...	Banana	plasma membrane	17.79	63.35
TraesCS4B01G322300.1	Wheat	plasma membrane	24.78	59.82
KRH74091	Soybean	plasma membrane	39.14	58.56
HORVU1Hr1G085680.1	Barley	plasma membrane	21.86	58.31
TraesCS6B01G470700.2	Wheat	plasma membrane	32.91	57.05
VIT_03s0038g03200.t01	Wine grape	plastid	43.2	56.29
KRH14024	Soybean	plasma membrane	39.39	55.46
Solyc01g112090.2.1	Tomato	plastid	41.42	53.62
PGSC0003DMT400047961	Potato	plastid	41.93	53.57
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	18.04	52.01
HORVU7Hr1G109470.1	Barley	golgi, plasma membrane, vacuole	9.53	50.34
TraesCS6A01G418800.1	Wheat	plastid	35.07	49.37
KXG32398	Sorghum	plastid	34.05	49.36
Os09t0548300-01	Rice	plastid	36.09	49.22
KXG36122	Sorghum	mitochondrion, plasma membrane	35.83	48.37
Zm00001d021446_P002	Maize	plastid	35.45	48.19
TraesCS7D01G031100.1	Wheat	plastid	34.56	47.55
Zm00001d040665_P001	Maize	plastid	33.16	46.77
TraesCS6D01G407900.1	Wheat	plastid	35.07	46.39
HORVU6Hr1G095270.9	Barley	golgi, plasma membrane, plastid	34.82	44.99
CDY07737	Canola	plastid	27.83	41.09
CDY63154	Canola	plastid	26.43	40.7
CDX74016	Canola	extracellular, plasma membrane, vacuole	6.73	38.41
CDX74015	Canola	plasma membrane	23.89	36.72
CDY22150	Canola	cytosol, plasma membrane, vacuole	24.27	36.17
CDY07959	Canola	plasma membrane	24.4	36.16
CDY27977	Canola	endoplasmic reticulum, extracellular, plasma membrane	9.4	36.1
CDX74014	Canola	plasma membrane	24.02	35.73
CDY07957	Canola	plasma membrane	24.02	35.73
CDY28001	Canola	plasma membrane	23.89	35.47
CDY66973	Canola	plasma membrane	23.13	35.2
CDY29628	Canola	plasma membrane	23.0	35.08
CDY35980	Canola	plasma membrane	23.89	35.07
CDY01220	Canola	plasma membrane	23.0	35.01
CDY65471	Canola	plasma membrane	23.0	34.81
CDY03629	Canola	plasma membrane	22.87	34.62
HORVU6Hr1G041060.5	Barley	extracellular	5.46	33.86
CDY65815	Canola	plasma membrane	13.09	23.36
CDY27978	Canola	plasma membrane	12.96	22.27
CDX83192	Canola	plastid	13.6	19.96
CDX82020	Canola	plastid	13.21	18.74
CDY42600	Canola	mitochondrion	12.45	18.28
CDY41956	Canola	mitochondrion	12.33	18.1

Protein Annotations

MapMan:24.2.4.1.3	Gene3D:3.40.50.1240	GO:A0A078DSW1	EnsemblPlants:CDX90273	ProteinID:CDX90273	ProteinID:CDX90273.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150
GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00150845001	InterPro:His_PPase_superfam
InterPro:His_Pase_superF_clade-1	InterPro:IPR029033	InterPro:MATE_fam	PFAM:PF00300	PFAM:PF01554	PANTHER:PTHR42893
PANTHER:PTHR42893:SF3	SMART:SM00855	SUPFAM:SSF53254	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0004EF3F8D
SEG:seg	:	:	:	:	:

Description

BnaA08g17110D

Coordinates

chrLK031862:-:1016244..1021274

Molecular Weight (calculated)

85555.8 Da

IEP (calculated)

8.525

GRAVY (calculated)

0.246

Length

787 amino acids

Sequence
(BLAST)

001: MESTGSARLV GGNQVSLPLT TTTHHRFAKV KRQGNFQPIN DVFAPQAYSL HANPHSVSPF VTRRKSQINS DCGVFKLEEE EDDSLPEVNG VHSGNSRPVD
101: VKRELVMLSL PAIAGQAIDP LTLLMETAYI GRLGSVELGS AAVSMSIFNT ISKLFNVPLL SVSTSFVAED IAKVAAQDLA EEDMHGDRPS QGLPERRQLS
201: SVSTALVLAI GIGIFEALAL SLLSGPFLRL MGIQSTSEMF IPARQFLVLR ALGAPAYVVS LALQGIFRGF KDTKTPVYCL GIGNLLAVFL FPLFIYQFRM
301: GVAGAAISSV ISQYTVTIVM IVLLNKRVIL LPPKLGSLKF GDYLKSGGFV LGRTLSVLMT MTVATSMAAR QGAFAMAAHQ ICMQVWLAVS MLTDALASSG
401: QALIASSASK RDFEGVKEVT TFVLKIGVVT GIALAIVLGM SFSSIAGLFS KDPEVLQIVR KGVLFVAATQ PITALAFIFD GLHYGMSDFP YAAWSMMVVG
501: GISSAFMLYA PAGLGLSGVW VGLSMFMGFR MMAGFGRLMW KKGPWWFMHT TCLVFCREKM EDSSASFVGN RYWVLRHGKS IPNERGLIVS SMENGVLPEY
601: QLAPDGVAQA QLAGQSLLKQ LEESKVSLDK VRICYSPFSR TTHTAKVVAQ VLNLPFDSPQ CKMMETLRER YFGPTFELKS HDKYPEIWDL DEKDPFMGPE
701: GGESADDVVS RLTTAMLSME AEFQRCAILV VSHGDPLQML QNIMHSAKQQ SGGDGGLAER LQKSRVASVL SQHRKFALLT GELRPLL

Best Arabidopsis Sequence Match ( AT4G38380.2 )
(BLAST)

001: MESSRVVVGG GLPLANRRNS SFAKPKIQQG TFLPLSRINN VSAPQKCSLH TNPNPMFPFV TRRKSQTNPD CGVVKLGEED DSCSSLDKLP EVNGVHTGVA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASEDSQS DIPSQGLPER
201: KQLSSVSTAL VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY
301: KFRMGVAGAA ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL
401: ASSGQALIAS SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM
501: MVVGGISSAF MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA

Arabidopsis Description

DTX45Protein DETOXIFICATION 45, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.