CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011880.1-P	Field mustard	mitochondrion	99.81	99.44
CDY42600	Canola	mitochondrion	99.44	99.44
AT4G39030.1	Thale cress	mitochondrion	88.62	87.48
CDY65815	Canola	plasma membrane	55.22	67.12
VIT_03s0038g00410.t01	Wine grape	cytosol, peroxisome, plasma membrane	58.21	61.3
OQU84246	Sorghum	plasma membrane	47.95	60.61
GSMUA_Achr1P16310_001	Banana	plasma membrane	47.57	60.14
CDX83192	Canola	plastid	58.4	58.4
CDX82020	Canola	plastid	59.33	57.3
VIT_03s0038g00430.t01	Wine grape	plastid	58.58	55.38
Os02t0122200-00	Rice	plastid, vacuole	48.32	54.3
PGSC0003DMT400008058	Potato	plastid	55.78	53.68
HORVU6Hr1G012070.9	Barley	peroxisome, plastid	50.56	53.66
Solyc01g110280.2.1	Tomato	plastid	55.6	53.5
TraesCS6B01G090100.1	Wheat	plasma membrane	50.0	52.24
PGSC0003DMT400008778	Potato	plastid	52.99	52.21
PGSC0003DMT400008050	Potato	mitochondrion, plasma membrane, plastid, vacuole	46.46	52.09
TraesCSU01G117300.1	Wheat	plastid	51.68	51.87
TraesCS6A01G066900.3	Wheat	plasma membrane, plastid, vacuole	51.49	51.69
Zm00001d015060_P001	Maize	plastid	51.68	50.83
KRH24389	Soybean	extracellular	8.58	38.66
CDY28001	Canola	plasma membrane	19.78	20.0
CDY35980	Canola	plasma membrane	19.78	19.78
CDX74015	Canola	plasma membrane	18.84	19.73
CDY07957	Canola	plasma membrane	19.4	19.66
CDX74014	Canola	plasma membrane	19.4	19.66
CDY07959	Canola	plasma membrane	19.4	19.59
CDY22150	Canola	cytosol, plasma membrane, vacuole	19.22	19.51
CDY07737	Canola	plastid	19.22	19.32
CDY63154	Canola	plastid	18.1	18.98
CDX74016	Canola	extracellular, plasma membrane, vacuole	4.85	18.84
CDY29628	Canola	plasma membrane	17.91	18.6
CDY65471	Canola	plasma membrane	17.91	18.46
CDY03629	Canola	plasma membrane	17.91	18.46
CDY66973	Canola	plasma membrane	17.72	18.38
CDY01220	Canola	plasma membrane	17.72	18.38
CDY27977	Canola	endoplasmic reticulum, extracellular, plasma membrane	6.53	17.07
CDY27978	Canola	plasma membrane	13.06	15.28
CDY12082	Canola	plastid	18.1	12.34
CDX90273	Canola	plastid	18.1	12.33

Protein Annotations

MapMan:11.8.4.1	MapMan:24.2.4.1.2	GO:A0A078HW30	UniProt:A0A078HW30	EnsemblPlants:CDY41956	ProteinID:CDY41956
ProteinID:CDY41956.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00073946001	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF9	TIGRFAMs:TIGR00797
TMHMM:TMhelix	UniParc:UPI0004EE5EFE	SEG:seg	:	:	:

Description

BnaA01g05280DProtein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A078HW30]

Coordinates

chrLK032511:+:68775..72122

Molecular Weight (calculated)

58119.6 Da

IEP (calculated)

9.896

GRAVY (calculated)

0.465

Length

536 amino acids

Sequence
(BLAST)

001: MLMKTQRLTI SPFLPTKSHQ PLIRCLGGGS VLTRRKLGGI TTAAAPIFQG KPVVTRREIK TGRITRNCVE NDGGTEEEEE KKSRGLVMES VWEQMKEIVK
101: FTGPAMGMWV CGPLMSLIDT VVIGQGSSVE LAALGPGTVL CDHMSYVFMF LSVATSNMVA TSLAKQDKKE AQHQISVLLF IGLVCGLMML LLTRLFGPWA
201: VTAFTRGKNI EIVPAANTYV QIRGLAWPFI LVGLVAQSAS LGMKNSWGPL KALAAATVIN GLGDTILCLF LGQGIAGAAW ATTISQVVSA YMMMDSLNKE
301: GYNAYSFAVP TPQELWKISA LAAPVFISIF SKIAFYSFII YCATSMGTHV LAAHQVMAQT YRMCNVWGEP LSQTAQSFMP EMLYGANRNL PKARTLLKSL
401: MIIGATLGLV LGIIGTSVPG LFPGVYTHDK VIITEMHRLL IPFFMALSAL PMTVSLEGTL LAGRDLKFVS SVMSSSFVLG CLTLMFVTRS GYGLVGCWMV
501: LVGFQWGRFG LYLRRLLSPG GILNTDVLTT KKIKSV

Best Arabidopsis Sequence Match ( AT4G39030.1 )
(BLAST)

001: MLIKSQRLTL FSPLLSKTRR IPVNSHQTLV AESVITRRTL GAITATPSFH KNPVVIRRRI KLERVTRNCV RIDREIDEEE EEEEKERGDL VKQSIWEQMK
101: EIVKFTGPAM GMWICGPLMS LIDTVVIGQG SSIELAALGP GTVLCDHMSY VFMFLSVATS NMVATSLAKQ DKKEAQHQIS VLLFIGLVCG LMMLLLTRLF
201: GPWAVTAFTR GKNIEIVPAA NKYIQIRGLA WPFILVGLVA QSASLGMKNS WGPLKALAAA TIINGLGDTI LCLFLGQGIA GAAWATTASQ IVSAYMMMDS
301: LNKEGYNAYS FAIPSPQELW KISALAAPVF ISIFSKIAFY SFIIYCATSM GTHVLAAHQV MAQTYRMCNV WGEPLSQTAQ SFMPEMLYGA NRNLPKARTL
401: LKSLMIIGAT LGLVLGVIGT AVPGLFPGVY THDKVIISEM HRLLIPFFMA LSALPMTVSL EGTLLAGRDL KFVSSVMSSS FIIGCLTLMF VTRSGYGLLG
501: CWFVLVGFQW GRFGLYLRRL LSPGGILNSD GPSPYTVEKI KSI

Arabidopsis Description

DTX47Protein DETOXIFICATION 47, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q945F0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.