Factsheet for PGSC0003DMT400008058

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
vacuole 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g110280.2.1	Tomato	plastid	95.33	95.33
PGSC0003DMT400008050	Potato	mitochondrion, plasma membrane, plastid, vacuole	71.63	83.47
PGSC0003DMT400008778	Potato	plastid	68.94	70.59
CDY65815	Canola	plasma membrane	55.48	70.07
GSMUA_Achr1P16310_001	Banana	plasma membrane	50.09	65.8
VIT_03s0038g00410.t01	Wine grape	cytosol, peroxisome, plasma membrane	59.96	65.62
OQU84246	Sorghum	plasma membrane	48.83	64.15
CDX82020	Canola	plastid	60.68	60.9
CDX83192	Canola	plastid	58.35	60.63
Bra031182.1-P	Field mustard	plastid	59.78	60.33
KRH29368	Soybean	plastid	58.53	59.71
KRH29367	Soybean	plastid	58.17	59.12
AT2G21340.1	Thale cress	plastid	58.71	58.5
VIT_03s0038g00430.t01	Wine grape	plastid	58.89	57.85
HORVU6Hr1G012070.9	Barley	peroxisome, plastid	51.53	56.83
Os02t0122200-00	Rice	plastid, vacuole	48.65	56.81
Bra000583.1-P	Field mustard	plastid	52.42	56.7
CDY42600	Canola	mitochondrion	53.68	55.78
CDY41956	Canola	mitochondrion	53.68	55.78
Bra011880.1-P	Field mustard	mitochondrion	53.68	55.58
TraesCS6B01G090100.1	Wheat	plasma membrane	50.81	55.17
AT4G39030.1	Thale cress	mitochondrion	53.68	55.06
TraesCS6A01G066900.3	Wheat	plasma membrane, plastid, vacuole	52.78	55.06
TraesCSU01G117300.1	Wheat	plastid	52.6	54.87
Zm00001d015060_P001	Maize	plastid	53.14	54.31
KRH24389	Soybean	extracellular	8.44	39.5
PGSC0003DMT400028660	Potato	endoplasmic reticulum, plasma membrane	16.34	22.92
PGSC0003DMT400018991	Potato	cytosol, plasma membrane, vacuole	19.75	21.48
PGSC0003DMT400047961	Potato	plastid	22.44	20.29
PGSC0003DMT400017707	Potato	cytosol, plasma membrane, vacuole	19.39	20.11
PGSC0003DMT400017700	Potato	plasma membrane	19.03	19.74
PGSC0003DMT400027815	Potato	cytosol, plasma membrane, vacuole	18.49	19.73
PGSC0003DMT400022359	Potato	plastid	19.21	17.89

Protein Annotations

EntrezGene:102582150	MapMan:11.8.4.1	MapMan:24.2.4.1.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	UniProt:M0ZTZ6	InterPro:MATE_fam	PFAM:PF01554	EnsemblPlantsGene:PGSC0003DMG402003112
PGSC:PGSC0003DMG402003112	EnsemblPlants:PGSC0003DMT400008058	PANTHER:PTHR42893	PANTHER:PTHR42893:SF9	TMHMM:TMhelix	UniParc:UPI0002949C60
RefSeq:XP_006362009.1	RefSeq:XP_015158265.1	SEG:seg	:	:	:

Description

DNA-damage-inducible protein f [Source:PGSC_GENE;Acc:PGSC0003DMG402003112]

Coordinates

chr1:-:86572032..86579781

Molecular Weight (calculated)

60767.7 Da

IEP (calculated)

7.694

GRAVY (calculated)

0.549

Length

557 amino acids

Sequence
(BLAST)

001: MHLETLTCKS HIIPIEIPKF NLNFHVDFSS TRRRTCRVTS LTRICNHRKR IITACVNHSQ EIPVNLENLH SNLNSCTSAE EQVEAVTVRE EIPVVDSNAK
101: GEFSGNESIW AQVVEIVKFS GPAVGLWLCG PLMSLIDTAV IGQGSSIELA ALGPGTVFCD NTSYVFMFLS IATSNLVATA LAKQDKDEVQ HQISILLFIG
201: LACGILMFIF TRLFGTWGIT AFTGANNMEI VNAANTYVQI RGLAWPAMLV GWVAQSASLG MKDSWGPLKA LAVATAINGI GDIALCRFFG YGIAGAAWAT
301: MVSQVVAAYM MIAALSKKGY NGFALSIPSF DEVLQIFTLA APVFLTMMSK VAFYSLLVYY ATSMGTHTAA AHQVMLQLFC IFAVWGEPLS QTAQSFMPEL
401: LYGVNRNLSK ARMLLKSLLI IGASNGLILG SAGVSISWFF PQLFSSDPLV IQEMHKVLLQ LFLTLWVSPC VHSLEGTLLA GRDLKFISIS MTAIFGLASL
501: LVMLFSSKGF GLTGCWFALV AFQWTRFLVA LRRLTLADGI LYLEGSVHDE FHKLKAT

Best Arabidopsis Sequence Match ( AT2G21340.1 )
(BLAST)

001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTAFTGVKN ADIVPAANKY VQIRGLAWPA VLIGWVAQSA SLGMKDSWGP LKALAVASAI NGVGDVVLCT FLGYGIAGAA
301: WATMVSQVVA AYMMMDALNK KGYSAFSFCV PSPSELLTIF GLAAPVFITM MSKVLFYTLL VYFATSMGTN IIAAHQVMLQ IYTMSTVWGE PLSQTAQSFM
401: PELLFGINRN LPKARVLLKS LVIIGATLGI VVGTIGTAVP WLFPGIFTRD KVVTSEMHKV IIPYFLALSI TPSTHSLEGT LLAGRDLRYI SLSMTGCLAV
501: AGLLLMLLSN GGFGLRGCWY ALVGFQWARF SLSLFRLLSR DGVLYSEDTS RYAEKVKAA

Arabidopsis Description

DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.