Factsheet for PGSC0003DMT400047961

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g112090.2.1	Tomato	plastid	93.51	94.74
KRH74091	Soybean	plasma membrane	54.55	63.88
TraesCS4B01G322300.1	Wheat	plasma membrane	33.12	62.58
GSMUA_AchrUn_...	Banana	plasma membrane	22.24	61.99
HORVU1Hr1G085680.1	Barley	plasma membrane	28.9	60.34
TraesCS6B01G470700.2	Wheat	plasma membrane	43.99	59.69
VIT_03s0038g03200.t01	Wine grape	plastid	57.95	59.11
KRH14024	Soybean	plasma membrane	53.57	59.03
Bra010745.1-P	Field mustard	plastid	51.14	58.66
AT4G38380.2	Thale cress	plastid	52.6	57.86
HORVU7Hr1G109470.1	Barley	golgi, plasma membrane, vacuole	13.64	56.38
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	24.51	55.31
KXG32398	Sorghum	plastid	46.75	53.04
PGSC0003DMT400028660	Potato	endoplasmic reticulum, plasma membrane	33.93	52.64
TraesCS6A01G418800.1	Wheat	plastid	47.24	52.06
Os09t0548300-01	Rice	plastid	47.56	50.78
Zm00001d040665_P001	Maize	plastid	45.62	50.36
Zm00001d021446_P002	Maize	plastid	46.59	49.57
KXG36122	Sorghum	mitochondrion, plasma membrane	46.59	49.23
TraesCS7D01G031100.1	Wheat	plastid	45.45	48.95
HORVU6Hr1G095270.9	Barley	golgi, plasma membrane, plastid	48.21	48.77
TraesCS6D01G407900.1	Wheat	plastid	46.75	48.4
PGSC0003DMT400022359	Potato	plastid	46.75	48.16
CDX90273	Canola	plastid	53.57	41.93
CDY12082	Canola	plastid	53.08	41.6
PGSC0003DMT400018991	Potato	cytosol, plasma membrane, vacuole	32.79	39.45
PGSC0003DMT400027815	Potato	cytosol, plasma membrane, vacuole	32.95	38.89
PGSC0003DMT400017707	Potato	cytosol, plasma membrane, vacuole	31.17	35.75
PGSC0003DMT400017700	Potato	plasma membrane	30.84	35.38
HORVU6Hr1G041060.5	Barley	extracellular	6.98	33.86
PGSC0003DMT400008058	Potato	plastid	20.29	22.44
PGSC0003DMT400008778	Potato	plastid	19.64	22.24
PGSC0003DMT400008050	Potato	mitochondrion, plasma membrane, plastid, vacuole	16.88	21.76

Protein Annotations

EntrezGene:102604703	MapMan:24.2.4.1.3	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	UniProt:M1BLP8	InterPro:MATE_fam	PFAM:PF01554	EnsemblPlantsGene:PGSC0003DMG400018638	PGSC:PGSC0003DMG400018638
EnsemblPlants:PGSC0003DMT400047961	PANTHER:PTHR42893	PANTHER:PTHR42893:SF3	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI00029592D3
RefSeq:XP_006364530.1	SEG:seg	:	:	:	:

Description

DNA-damage-inducible protein f [Source:PGSC_GENE;Acc:PGSC0003DMG400018638]

Coordinates

chr1:-:87852373..87860890

Molecular Weight (calculated)

66141.0 Da

IEP (calculated)

8.934

GRAVY (calculated)

0.470

Length

616 amino acids

Sequence
(BLAST)

001: MAAAQLTSKA MYNGFTELEV KEEISKSCSL RFSNRRCSSF SRINQNSLKH VYGSNNCSLS IGKSKRFSYS PALFPRKRKS LRFRNKFSSE SGAEASDLQD
101: TTAVKGIDDL SSSSGEVDEL NETVPIITNV ESESIEEAPT SSSQSEDVRC ELVMLSLPAI AGQAIDPLAQ LMETAYIGRL GSVELASAGV SISIFNIISK
201: LFNIPLLSVA TSFVAEDIAK NATKVYMSEG AKGTDGRLPT GVAERHQFSS VSTALFLAVG IGIIEALALA LGSELLLGLM GISSTSPMRV PAKQFLAVRA
301: LGAPAFVVSL ALQGIFRGFK DTKTPVFCLG IGNFAAIFLF PLLMHYFGLG VSGAAISTVI SQYLVAFSMM WYLNQRVMIL PPRFEELQFG GYLKSGGFLI
401: GRTLSVLFTM TLATSMAARQ GAVAMAAHQI CLQVWLAVSL LTDALAASAQ TLIASYLSKG DYVVATEITH YVLKIGLVAG VFLAVALGVS FGSLSTLFTK
501: DTEVLAVVST GLLFVSASQP INALAFIFDG LHYGVSDFAY AARSMMLVGA ISSAFLLCAP RLLGLRGVWL GLTLFMSLRM MAGFIRLLSK KSPWWFLHRD
601: TDEAMVSRIL ISKVIS

Best Arabidopsis Sequence Match ( AT4G38380.2 )
(BLAST)

001: MESSRVVVGG GLPLANRRNS SFAKPKIQQG TFLPLSRINN VSAPQKCSLH TNPNPMFPFV TRRKSQTNPD CGVVKLGEED DSCSSLDKLP EVNGVHTGVA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASEDSQS DIPSQGLPER
201: KQLSSVSTAL VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY
301: KFRMGVAGAA ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL
401: ASSGQALIAS SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM
501: MVVGGISSAF MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA

Arabidopsis Description

DTX45Protein DETOXIFICATION 45, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.