Factsheet for Os09t0548300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 1
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

extracellular: 24083427
plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36122	Sorghum	mitochondrion, plasma membrane	79.72	78.9
Zm00001d021446_P002	Maize	plastid	77.12	76.86
GSMUA_AchrUn_...	Banana	plasma membrane	25.48	66.52
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	30.85	65.2
Os01t0162101-00	Rice	endoplasmic reticulum, extracellular	4.16	63.16
KRH74091	Soybean	plasma membrane	49.39	54.18
Bra010745.1-P	Field mustard	plastid	48.35	51.96
AT4G38380.2	Thale cress	plastid	50.26	51.79
Solyc02g061760.2.1	Tomato	plastid	48.18	50.45
KRH14024	Soybean	plasma membrane	48.87	50.45
VIT_03s0038g03200.t01	Wine grape	plastid	51.82	49.5
Solyc01g112090.2.1	Tomato	plastid	50.95	48.36
PGSC0003DMT400047961	Potato	plastid	50.78	47.56
PGSC0003DMT400022359	Potato	plastid	46.97	45.32
Os12t0106600-01	Rice	plastid	40.38	42.36
Os10t0206800-01	Rice	plasma membrane	34.49	37.06
CDY12082	Canola	plastid	49.39	36.26
CDX90273	Canola	plastid	49.22	36.09
Os03t0216700-01	Rice	plasma membrane, vacuole	33.97	34.33
Os01t0919100-01	Rice	cytosol, peroxisome, plasma membrane	33.62	32.44
Os02t0122200-00	Rice	plastid, vacuole	16.46	19.92
Os12t0107500-01	Rice	extracellular	0.35	1.74

Protein Annotations

MapMan:24.2.4.1.3	EntrezGene:4347774	UniProt:A0A0P0XQP1	ProteinID:BAT09273.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:MATE_fam	EnsemblPlantsGene:Os09g0548300	EnsemblPlants:Os09t0548300-01	PFAM:PF01554
PANTHER:PTHR42893	PANTHER:PTHR42893:SF3	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0001C7AE77	RefSeq:XP_015612282.1
SEG:seg	:	:	:	:	:

Description

Similar to predicted protein. (Os09t0548300-01)

Coordinates

chr9:+:21681127..21687492

Molecular Weight (calculated)

60069.8 Da

IEP (calculated)

9.640

GRAVY (calculated)

0.557

Length

577 amino acids

Sequence
(BLAST)

001: MELAGGGTGV VRQRAEPLGA GLLLRGGGRS VGGGGIGCAR RATLRGLALS PLARRAVSAA GGHFLPRRAV RAAAAAGDGG FYGEEDAASD QPFPARASPS
101: DDANDSTAVR SLGGDHPGEI KKELLNLALP AIVGQAIDPV AQLLETAYIG RLGPVELASA AVGVSVFNII SKLFNIPLLS ITTSFVAEDV ARHDSDQFTS
201: EGNMSSESGG RKRLPSISSA ILLAAAIGVI EASALILGSE ILLSIMGVSH ASTMHSPAKL FLSLRALGAP AVVVSLAIQG IFRGLKDTKT PLLYSGLGNI
301: SAVLLLPFLV YSLNLGLNGA ALATIASQYL GMFLLLWSLS KRAVLLPPKI EDLDFVGYIK SGGMLLGRTL SVLITMTLGT AMAARQGTIA MAAHQICLQV
401: WLAVSLLSDA LAVSAQALIA SSFAKLDYEK VKEVTYYVLK IGLLVGAALA LLLFASFGRI AELFSKDPMV LQIVGSGVLF VSASQPINAL AFIFDGLHFG
501: VSDFSYSASS MITVGAISSL FLLYAPKVFG LPGVWAGLAL FMGLRMTAGF LRLGSRAGPW WFLHQKEPTY KLHSSTC

Best Arabidopsis Sequence Match ( AT4G38380.3 )
(BLAST)

001: MLLCVSCLCN ALVSVLAREV NGVHTGVARP VDIKRELVML SLPAIAGQAI DPLTLLMETA YIGRLGSVEL GSAGVSMAIF NTISKLFNIP LLSVATSFVA
101: EDIAKIAAQD LASEDSQSDI PSQGLPERKQ LSSVSTALVL AIGIGIFEAL ALSLASGPFL RLMGIQSMSE MFIPARQFLV LRALGAPAYV VSLALQGIFR
201: GFKDTKTPVY CLGIGNFLAV FLFPLFIYKF RMGVAGAAIS SVISQYTVAI LMLILLNKRV ILLPPKIGSL KFGDYLKSGG FVLGRTLSVL VTMTVATSMA
301: ARQGVFAMAA HQICMQVWLA VSLLTDALAS SGQALIASSA SKRDFEGVKE VTTFVLKIGV VTGIALAIVL GMSFSSIAGL FSKDPEVLRI VRKGVLFVAA
401: TQPITALAFI FDGLHYGMSD FPYAACSMMV VGGISSAFML YAPAGLGLSG VWVGLSMFMG LRMVAGFSRL MWRKGPWWFM HTSDKRLA

Arabidopsis Description

DTX45Protein DETOXIFICATION 45, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.