Factsheet for VIT_03s0038g03200.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74091	Soybean	plasma membrane	54.8	62.93
TraesCS4B01G322300.1	Wheat	plasma membrane	33.61	62.27
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	27.98	61.9
Bra010745.1-P	Field mustard	plastid	54.8	61.64
KRH14024	Soybean	plasma membrane	56.79	61.36
GSMUA_AchrUn_...	Banana	plasma membrane	22.35	61.09
TraesCS6B01G470700.2	Wheat	plasma membrane	44.87	59.69
HORVU1Hr1G085680.1	Barley	plasma membrane	29.14	59.66
AT4G38380.2	Thale cress	plastid	54.8	59.11
Solyc01g112090.2.1	Tomato	plastid	59.27	58.88
PGSC0003DMT400047961	Potato	plastid	59.11	57.95
HORVU7Hr1G109470.1	Barley	golgi, plasma membrane, vacuole	13.91	56.38
KXG32398	Sorghum	plastid	48.51	53.96
TraesCS6A01G418800.1	Wheat	plastid	49.34	53.31
Os09t0548300-01	Rice	plastid	49.5	51.82
Zm00001d021446_P002	Maize	plastid	49.5	51.64
KXG36122	Sorghum	mitochondrion, plasma membrane	49.5	51.29
Zm00001d040665_P001	Maize	plastid	47.19	51.08
TraesCS7D01G031100.1	Wheat	plastid	47.85	50.52
TraesCS6D01G407900.1	Wheat	plastid	48.34	49.08
HORVU6Hr1G095270.9	Barley	golgi, plasma membrane, plastid	48.51	48.11
VIT_08s0058g00510.t01	Wine grape	plastid	42.72	46.24
CDX90273	Canola	plastid	56.29	43.2
CDY12082	Canola	plastid	56.13	43.13
VIT_06s0004g02140.t01	Wine grape	cytosol, plasma membrane, vacuole	34.11	40.16
VIT_08s0007g08200.t01	Wine grape	plasma membrane	32.78	39.05
VIT_13s0064g00940.t01	Wine grape	plasma membrane	34.77	38.39
VIT_13s0064g00930.t01	Wine grape	plasma membrane	32.12	36.19
HORVU6Hr1G041060.5	Barley	extracellular	7.45	35.43
VIT_13s0019g05200.t01	Wine grape	cytosol	4.97	34.88
VIT_03s0038g00410.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.04	22.59
VIT_03s0038g00430.t01	Wine grape	plastid	18.54	19.75

Protein Annotations

EntrezGene:100267546	wikigene:100267546	MapMan:24.2.4.1.3	ProteinID:CBI37797	ProteinID:CBI37797.3	UniProt:D7U4X8
EMBL:FN596508	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EntrezGene:LOC100267546	wikigene:LOC100267546	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF3
TIGR:TC63598	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0001BE50B3	ArrayExpress:VIT_03s0038g03200	EnsemblPlantsGene:VIT_03s0038g03200
EnsemblPlants:VIT_03s0038g03200.t01	RefSeq:XP_002278724	RefSeq:XP_002278724.2	RefSeq:XP_010646258.1	RefSeq:XP_010646263.1	RefSeq:XP_010646268.1
RefSeq:XP_010646274.1	RefSeq:XP_010646281.1	RefSeq:XP_010646306.1	RefSeq:XP_010646308.1	RefSeq:XP_010646312.1	SEG:seg

Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:D7U4X8]

Coordinates

chr3:-:2313944..2332671

Molecular Weight (calculated)

64526.6 Da

IEP (calculated)

8.949

GRAVY (calculated)

0.564

Length

604 amino acids

Sequence
(BLAST)

001: MAVMQLNGGV LATGLTSTGS GGGVIKKITG SSVVVQPSGE HNAFALIKSK GLRYEDVTRC HHQSLDLLRP FSPLVTCRRK HVFPVFNNHL GSDCGVDSSE
101: VEENIVVEKG NDIGKSSEVR ELKGITATLS RSLGVKRELI MLSLPAMAGQ ALDPLAQLME TAYIGRLGPV ELASAGVSIS IFNIISKLFN IPLLSISTSF
201: VAEDISKNAI NNSASEEFYQ EESTNGTPFV GVTERMQLSS VSTALLLAVG IGIFEAFALY FGSGWFLNLM GIPLASSMHA PARRFLSLRA LGAPAVVVSL
301: ALQGILRGFK DTKTPVLCLG VGNFAAVFLF PILMYYFQLG VTGAAISTVV SQYIVTFLMI WHLNKRAVLL PPKMGTLQFG DYIKSGGFLL GRTLAVLATM
401: TLATSVAARQ GPIAMAGHQI CLQVWLAVSL LTDALAASAQ AMIASSLSKG DYKAVKEITY FVLKTGLFTG IFLAVALSAF YGSLATIFTK DIEVLGIVRT
501: GVLFVCASQP INSLAFIFDG LHFGASDFPY AARSMMVIGA ICSAFLLYVP SLLGLQGVWL GLTLFMGLRM VAGVIRLASK TGPWWFLHED FQMAEVMNFG
601: SKTA

Best Arabidopsis Sequence Match ( AT4G38380.2 )
(BLAST)

001: MESSRVVVGG GLPLANRRNS SFAKPKIQQG TFLPLSRINN VSAPQKCSLH TNPNPMFPFV TRRKSQTNPD CGVVKLGEED DSCSSLDKLP EVNGVHTGVA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASEDSQS DIPSQGLPER
201: KQLSSVSTAL VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY
301: KFRMGVAGAA ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL
401: ASSGQALIAS SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM
501: MVVGGISSAF MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA

Arabidopsis Description

DTX45Protein DETOXIFICATION 45, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.