Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G470700.2 | Wheat | plasma membrane | 70.25 | 92.07 |
| TraesCS7D01G031100.1 | Wheat | plastid | 88.24 | 91.78 |
| HORVU1Hr1G085680.1 | Barley | plasma membrane | 45.04 | 90.85 |
| TraesCS6A01G418800.1 | Wheat | plastid | 84.87 | 90.34 |
| HORVU7Hr1G109470.1 | Barley | golgi, plasma membrane, vacuole | 21.68 | 86.58 |
| HORVU6Hr1G095270.9 | Barley | golgi, plasma membrane, plastid | 84.2 | 82.27 |
| KXG32398 | Sorghum | plastid | 67.39 | 73.85 |
| Zm00001d040665_P001 | Maize | plastid | 66.22 | 70.61 |
| KRH74091 | Soybean | plasma membrane | 47.9 | 54.18 |
| Solyc02g061760.2.1 | Tomato | plastid | 48.57 | 52.45 |
| KRH14024 | Soybean | plasma membrane | 47.56 | 50.63 |
| Bra010745.1-P | Field mustard | plastid | 45.21 | 50.09 |
| AT4G38380.2 | Thale cress | plastid | 46.39 | 49.29 |
| VIT_03s0038g03200.t01 | Wine grape | plastid | 49.08 | 48.34 |
| PGSC0003DMT400022359 | Potato | plastid | 47.73 | 47.49 |
| Solyc01g112090.2.1 | Tomato | plastid | 48.4 | 47.37 |
| PGSC0003DMT400047961 | Potato | plastid | 48.4 | 46.75 |
| TraesCS5D01G157000.2 | Wheat | plastid | 36.64 | 39.42 |
| TraesCS4D01G131900.1 | Wheat | plastid | 35.8 | 38.73 |
| TraesCS1D01G304800.1 | Wheat | plasma membrane | 30.08 | 36.02 |
| CDY12082 | Canola | plastid | 46.55 | 35.24 |
| CDX90273 | Canola | plastid | 46.39 | 35.07 |
| TraesCS4D01G245000.1 | Wheat | plasma membrane | 30.76 | 33.09 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G407900.1 | EnsemblPlantsGene:TraesCS6D01G407900 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:MATE_fam | ncoils:Coil | PANTHER:PTHR42893 | PANTHER:PTHR42893:SF3 | PFAM:PF01554 | SEG:seg |
| TIGR:cd13136 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | MapMan:24.2.4.1.3 | : | : |
Description
No Description!
Coordinates
chr6D:+:473364043..473373578
Molecular Weight (calculated)
62288.9 Da
IEP (calculated)
9.211
GRAVY (calculated)
0.588
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIQRALVSG QPALLCPSPS GWPRSSSSSS SRARRAPGAA SASASASSSS SPNRWPSLSL SLSRLGSGTT IIPTQAERLL LPLPGLLDFT SRRTGTAIPP
101: RLHALPLPPF QEDAALSLSK KEEEEEEEEE EDNALLLGSG LYPGTVGIDL ILLALPAVLG QAIDPMAQLM ETAYIGKLGA LELASAGIGV AIFNILSKIF
201: NIPLLSIATS FVAEDISKNA SKHSTSGKLE LPSVSSALVL AAAIGTIEAL ALFLGSGLFL KLMGVSPVSP MYKSARLFLS LRALGAPANV IMLAVQGIFR
301: GFKDTKTPVL FIGLGNLSAV ALLPLLIYGF KLGITGAAIS TVASQYIIAI LLMWSLSKRA VLLPPRVDQL EFGGYLKSGG MLLGRTLSIL LTMTIGTSMA
401: ARQGPTAMAA HQICLQVWLA VSLLADALAV SAQALIASSY AILDYKRVQK VAMFSLQIGL ASGLALAVGL YISFGSIAKL FTNDPQVLAV VSSCALFVCA
501: SQPVNALAFI FDGLHYGVSD FDYVAQATIV VGVISSLVLL YAPRVFGLAG VWAGLTTLMG LRMAAGILRL LWKSGPWSFL HEEPETKLQA QPLAS
101: RLHALPLPPF QEDAALSLSK KEEEEEEEEE EDNALLLGSG LYPGTVGIDL ILLALPAVLG QAIDPMAQLM ETAYIGKLGA LELASAGIGV AIFNILSKIF
201: NIPLLSIATS FVAEDISKNA SKHSTSGKLE LPSVSSALVL AAAIGTIEAL ALFLGSGLFL KLMGVSPVSP MYKSARLFLS LRALGAPANV IMLAVQGIFR
301: GFKDTKTPVL FIGLGNLSAV ALLPLLIYGF KLGITGAAIS TVASQYIIAI LLMWSLSKRA VLLPPRVDQL EFGGYLKSGG MLLGRTLSIL LTMTIGTSMA
401: ARQGPTAMAA HQICLQVWLA VSLLADALAV SAQALIASSY AILDYKRVQK VAMFSLQIGL ASGLALAVGL YISFGSIAKL FTNDPQVLAV VSSCALFVCA
501: SQPVNALAFI FDGLHYGVSD FDYVAQATIV VGVISSLVLL YAPRVFGLAG VWAGLTTLMG LRMAAGILRL LWKSGPWSFL HEEPETKLQA QPLAS
001: MESSRVVVGG GLPLANRRNS SFAKPKIQQG TFLPLSRINN VSAPQKCSLH TNPNPMFPFV TRRKSQTNPD CGVVKLGEED DSCSSLDKLP EVNGVHTGVA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASGLPER KQLSSVSTAL
201: VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY KFRMGVAGAA
301: ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL ASSGQALIAS
401: SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM MVVGGISSAF
501: MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASGLPER KQLSSVSTAL
201: VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY KFRMGVAGAA
301: ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL ASSGQALIAS
401: SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM MVVGGISSAF
501: MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA
Arabidopsis Description
DTX45Protein DETOXIFICATION 45, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.