Factsheet for TraesCS6A01G418800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G470700.2	Wheat	plasma membrane	74.42	91.63
HORVU1Hr1G085680.1	Barley	plasma membrane	47.59	90.17
TraesCS6D01G407900.1	Wheat	plastid	90.34	84.87
HORVU7Hr1G109470.1	Barley	golgi, plasma membrane, vacuole	22.36	83.89
HORVU6Hr1G095270.9	Barley	golgi, plasma membrane, plastid	87.12	79.97
KXG32398	Sorghum	plastid	71.91	74.03
Zm00001d040665_P001	Maize	plastid	70.3	70.43
KRH74091	Soybean	plasma membrane	51.7	54.94
Solyc02g061760.2.1	Tomato	plastid	51.7	52.45
KRH14024	Soybean	plasma membrane	51.16	51.16
Bra010745.1-P	Field mustard	plastid	48.3	50.28
VIT_03s0038g03200.t01	Wine grape	plastid	53.31	49.34
AT4G38380.2	Thale cress	plastid	49.37	49.29
Solyc01g112090.2.1	Tomato	plastid	52.06	47.86
PGSC0003DMT400022359	Potato	plastid	50.63	47.32
PGSC0003DMT400047961	Potato	plastid	52.06	47.24
TraesCS5A01G151800.2	Wheat	plastid	39.36	39.86
TraesCS4A01G180600.2	Wheat	plastid	37.57	38.18
TraesCS1A01G305200.1	Wheat	plasma membrane	32.2	36.22
CDY12082	Canola	plastid	49.91	35.5
CDX90273	Canola	plastid	49.37	35.07
TraesCS4A01G066800.1	Wheat	cytosol, plasma membrane, vacuole	32.56	32.91
TraesCS6A01G066900.3	Wheat	plasma membrane, plastid, vacuole	17.89	18.73

Protein Annotations

EnsemblPlants:TraesCS6A01G418800.1	EnsemblPlantsGene:TraesCS6A01G418800	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0055085
InterPro:MATE_fam	PANTHER:PTHR42893	PANTHER:PTHR42893:SF3	PFAM:PF01554	SEG:seg	TIGR:cd13136
TIGRFAMs:TIGR00797	TMHMM:TMhelix	MapMan:24.2.4.1.3	:	:	:

Description

No Description!

Coordinates

chr6A:-:616737841..616743756

Molecular Weight (calculated)

58208.0 Da

IEP (calculated)

9.373

GRAVY (calculated)

0.671

Length

559 amino acids

Sequence
(BLAST)

001: MGIHIQRALV SGQPALLCPS GWPSSLSSSS SSRTASASSS PWAGAGAGAG AGVGTTKPNA IIIPVLAKDF TRRRRTGTSI SPLHALPLSK EEEEEEEEDN
101: ALLFSSSGTV GIDLILLALP AVLGQAIDPM AQLMETAYIG KLGALELASA GIGVAIFNIL SKIFNIPLLS IATSFVAEDI SKNATKHSTS GKLQLPSVSS
201: ALVLAAAIGT IEALALFLGS GLFLKLMGVS PASPMYASAR LFLSLRALGA PANVIMLAVQ GIFRGFKDTK TPVLFIGLGN LSAVALLPLL IYGFKLGITG
301: AAISTVASQY IIAILLMWSL SKRAVLLPPK MDQLEFGGYL KSGGMLLGRT LSILLTMTIG TSMAARQGPT AMAAHQICLQ VWLAVSLLAD ALAVSAQALI
401: ASSYAILDYK RVQKVAMYSL QIGLASGLAL AVGLYISFGS IAKLFTNDPQ VLAVVSSCAL FVCASQPVNA LAFIFDGLHY GVSDFDYVAQ ATIVVGVISS
501: LVLLYAPRVF GLAGVWAGLT TLMGLRMAAG ILRLLWKSGP WSFLHEEPET KLQAQPLAS

Best Arabidopsis Sequence Match ( AT4G38380.5 )
(BLAST)

001: MESSRVVVGG GLPLANRRNS SFAKPKIQQG TFLPLSRINN VSAPQKCSLH TNPNPMFPFV TRRKSQTNPD CGVVKLGEED DSCSSLDKLP EVNGVHTGVA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASGLPER KQLSSVSTAL
201: VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY KFRMGVAGAA
301: ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL ASSGQALIAS
401: SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM MVVGGISSAF
501: MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA

Arabidopsis Description

DTX45Protein DETOXIFICATION 45, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.