Factsheet for Solyc01g112090.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047961	Potato	plastid	94.74	93.51
KRH74091	Soybean	plasma membrane	54.93	63.5
TraesCS4B01G322300.1	Wheat	plasma membrane	33.39	62.27
GSMUA_AchrUn_...	Banana	plasma membrane	22.53	61.99
HORVU1Hr1G085680.1	Barley	plasma membrane	29.11	60.0
TraesCS6B01G470700.2	Wheat	plasma membrane	44.57	59.69
VIT_03s0038g03200.t01	Wine grape	plastid	58.88	59.27
KRH14024	Soybean	plasma membrane	54.11	58.86
Bra010745.1-P	Field mustard	plastid	51.81	58.66
AT4G38380.2	Thale cress	plastid	53.29	57.86
HORVU7Hr1G109470.1	Barley	golgi, plasma membrane, vacuole	13.65	55.7
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	24.67	54.95
Solyc02g061760.2.1	Tomato	plastid	49.18	54.27
Solyc10g085340.1.1	Tomato	golgi, plasma membrane	27.47	54.05
KXG32398	Sorghum	plastid	47.37	53.04
TraesCS6A01G418800.1	Wheat	plastid	47.86	52.06
Os09t0548300-01	Rice	plastid	48.36	50.95
Zm00001d040665_P001	Maize	plastid	46.22	50.36
KXG36122	Sorghum	mitochondrion, plasma membrane	47.04	49.06
Zm00001d021446_P002	Maize	plastid	46.55	48.88
TraesCS7D01G031100.1	Wheat	plastid	45.89	48.78
HORVU6Hr1G095270.9	Barley	golgi, plasma membrane, plastid	48.85	48.77
TraesCS6D01G407900.1	Wheat	plastid	47.37	48.4
CDX90273	Canola	plastid	53.62	41.42
CDY12082	Canola	plastid	53.29	41.22
Solyc11g065820.1.1	Tomato	cytosol, plasma membrane, vacuole	33.22	39.61
Solyc01g008420.2.1	Tomato	plasma membrane	33.06	37.5
Solyc01g087150.2.1	Tomato	plasma membrane	31.41	36.38
HORVU6Hr1G041060.5	Barley	extracellular	7.24	34.65
Solyc10g085330.1.1	Tomato	plastid	12.66	31.3
Solyc10g054100.1.1	Tomato	endoplasmic reticulum, vacuole	2.96	26.87
Solyc01g110280.2.1	Tomato	plastid	19.74	21.54
Solyc10g054110.1.1	Tomato	plastid	12.99	21.07

Protein Annotations

MapMan:24.2.4.1.3	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
UniProt:K4B470	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF3	EnsemblPlantsGene:Solyc01g112090.2
EnsemblPlants:Solyc01g112090.2.1	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0002767AC3	SEG:seg	:

Description

Protein DETOXIFICATION 45, chloroplastic [Source:Projected from Arabidopsis thaliana (AT4G38380) UniProtKB/Swiss-Prot;Acc:Q9SVE7]

Coordinates

chr1:+:98193410..98201391

Molecular Weight (calculated)

65278.8 Da

IEP (calculated)

8.604

GRAVY (calculated)

0.471

Length

608 amino acids

Sequence
(BLAST)

001: MAAAQLTSKA LYNGFTELEV KEEISKCCSL RFSHRHFSSF SRISQNSLKN VYGSNSCSLS IGKSKRFSYA PVLFPRKQKY LRFRNKFSSE SGAETSDLQY
101: TTAVKGMDDL SSSRGEVDEL NETVPIITNV ESESIEEAPT SSSQSEDVRR ELVMLSLPAI AGQAIDPLAQ LMETAYIGRL GSVELASAGV SISIFNIISK
201: LFNIPLLSVA TSFVAEDIAK NATKVNMSEG AKGTDGRFPT GVAERHQFSS VSTALFLAVG IGIIEALALA LGSELLLGLM GISSTSPMRV PTKQFLAVRA
301: LGAPAFVVSL ALQGIFRGFK DTKTPVFCLG IGNFAAIFLF PLLMYYFGLG VSGAAISTVI SQYLVAFSMM WYLNQRVMIL PPRFEELQFG GYLKSGGFLI
401: GRTLSVLFTM TLATSMAARQ GAVAMAGHQI CLQVWLAVSL LTDALAASAQ ALIASYLSKG DYVVATEITH YVLKIGLVAG VFLAAALGVS FGSLSTLFTK
501: DTEVLAVVST GLLFVSASQP INALAFIFDG LHYGVSDFAY AAHSMMLVGA ISSGFLLCAP RLLGLPGVWL GLTLFMGLRM MAGFIRLLSK RSPWWFLHCD
601: ANEAKVIS

Best Arabidopsis Sequence Match ( AT4G38380.2 )
(BLAST)

001: MESSRVVVGG GLPLANRRNS SFAKPKIQQG TFLPLSRINN VSAPQKCSLH TNPNPMFPFV TRRKSQTNPD CGVVKLGEED DSCSSLDKLP EVNGVHTGVA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASEDSQS DIPSQGLPER
201: KQLSSVSTAL VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY
301: KFRMGVAGAA ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL
401: ASSGQALIAS SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM
501: MVVGGISSAF MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA

Arabidopsis Description

DTX45Protein DETOXIFICATION 45, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.