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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • vacuole 2
  • cytosol 1
  • plasma membrane 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g110280.2.1 Tomato plastid 71.2 47.94
Solyc10g085330.1.1 Tomato plastid 9.33 14.23
Solyc11g065820.1.1 Tomato cytosol, plasma membrane, vacuole 18.4 13.53
Solyc01g008420.2.1 Tomato plasma membrane 19.2 13.43
Solyc01g087150.2.1 Tomato plasma membrane 18.67 13.33
Solyc01g112090.2.1 Tomato plastid 21.07 12.99
Solyc02g061760.2.1 Tomato plastid 18.4 12.52
Solyc10g085340.1.1 Tomato golgi, plasma membrane 9.07 11.0
Solyc10g054100.1.1 Tomato endoplasmic reticulum, vacuole 0.27 1.49
Protein Annotations
EnsemblPlants:Solyc10g054110.1.1EnsemblPlantsGene:Solyc10g054110.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR42893PANTHER:PTHR42893:SF9PFAM:PF01554SEG:seg
TMHMM:TMhelixUniParc:UPI000276A9E2UniProt:K4D109MapMan:11.8.4.1MapMan:24.2.4.1.2:
Description
No Description!
Coordinates
chr10:-:54604528..54609771
Molecular Weight (calculated)
40818.1 Da
IEP (calculated)
7.193
GRAVY (calculated)
0.493
Length
375 amino acids
Sequence
(BLAST)
001: MSMCLQAINL NTFTYQSRTR IPIRNRTLVN VNSHLRIYPI CNIRKGIITA CSAPSQEILQ QKLSDEDETN AESSDSVENE QKVVVEFSAN ESIWNQTVEI
101: IKFSGPAVGL WLCGPLMSLI DTAVVGQGSS IELAALGPGT VFCDNTSYIF MFLSIATSNL VATSLARQDK AQVQHQISIL IFLGLVFGVL MFFCTRLFGV
201: RALTSFTGGK NIEIIKSANT YIQIRGLAWP ALLVGWVAQS ASLGMKDSWG PLKALAVATV INGVGDIVLC RVFSYGIAGA AWATMVSQVV AAYMMIEALN
301: NKGYKGFAIS VPSKDELLQI FMIAGPVFLT MMSKVAFYSL LVYFATSMGT QTIAAHQVMV QLFMICAVWG EPECC
Best Arabidopsis Sequence Match ( AT2G21340.1 )
(BLAST)
001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTAFTGVKN ADIVPAANKY VQIRGLAWPA VLIGWVAQSA SLGMKDSWGP LKALAVASAI NGVGDVVLCT FLGYGIAGAA
301: WATMVSQVVA AYMMMDALNK KGYSAFSFCV PSPSELLTIF GLAAPVFITM MSKVLFYTLL VYFATSMGTN IIAAHQVMLQ IYTMSTVWGE PLSQTAQSFM
401: PELLFGINRN LPKARVLLKS LVIIGATLGI VVGTIGTAVP WLFPGIFTRD KVVTSEMHKV IIPYFLALSI TPSTHSLEGT LLAGRDLRYI SLSMTGCLAV
501: AGLLLMLLSN GGFGLRGCWY ALVGFQWARF SLSLFRLLSR DGVLYSEDTS RYAEKVKAA
Arabidopsis Description
DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.