Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 6
- golgi 5
- plastid 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g110280.2.1 | Tomato | plastid | 67.16 | 8.08 |
| Solyc10g085340.1.1 | Tomato | golgi, plasma membrane | 20.9 | 4.53 |
| Solyc01g087150.2.1 | Tomato | plasma membrane | 23.88 | 3.05 |
| Solyc01g112090.2.1 | Tomato | plastid | 26.87 | 2.96 |
| Solyc01g008420.2.1 | Tomato | plasma membrane | 22.39 | 2.8 |
| Solyc11g065820.1.1 | Tomato | cytosol, plasma membrane, vacuole | 19.4 | 2.55 |
| Solyc02g061760.2.1 | Tomato | plastid | 20.9 | 2.54 |
| Solyc10g054110.1.1 | Tomato | plastid | 1.49 | 0.27 |
| Solyc10g085330.1.1 | Tomato | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc10g054100.1.1 | EnsemblPlantsGene:Solyc10g054100.1 | PANTHER:PTHR42893 | PANTHER:PTHR42893:SF9 | SEG:seg | SignalP:SignalP-TM |
| TMHMM:TMhelix | UniParc:UPI000276A9E1 | UniProt:K4D108 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr10:-:54595204..54596264
Molecular Weight (calculated)
7545.5 Da
IEP (calculated)
10.126
GRAVY (calculated)
0.681
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSIFVLSSV LLMLLSSKGL GLSGCWFALV IFQWSRFFMA LRRLTLSNGI LYSEEATQNE LQKLKAV
001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTGVKNADI VPAANKYVQI RGLAWPAVLI GWVAQSASLG MKDSWGPLKA LAVASAINGV GDVVLCTFLG YGIAGAAWAT
301: MVSQVVAAYM MMDALNKKGY SAFSFCVPSP SELLTIFGLA APVFITMMSK VLFYTLLVYF ATSMGTNIIA AHQVMLQIYT MSTVWGEPLS QTAQSFMPEL
401: LFGINRNLPK ARVLLKSLVI IGATLGIVVG TIGTAVPWLF PGIFTRDKVV TSEMHKVIIP YFLALSITPS THSLEGTLLA GRDLRYISLS MTGCLAVAGL
501: LLMLLSNGGF GLRGCWYALV GFQWARFSLS LFRLLSRDGV LYSEDTSRYA EKVKAA
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTGVKNADI VPAANKYVQI RGLAWPAVLI GWVAQSASLG MKDSWGPLKA LAVASAINGV GDVVLCTFLG YGIAGAAWAT
301: MVSQVVAAYM MMDALNKKGY SAFSFCVPSP SELLTIFGLA APVFITMMSK VLFYTLLVYF ATSMGTNIIA AHQVMLQIYT MSTVWGEPLS QTAQSFMPEL
401: LFGINRNLPK ARVLLKSLVI IGATLGIVVG TIGTAVPWLF PGIFTRDKVV TSEMHKVIIP YFLALSITPS THSLEGTLLA GRDLRYISLS MTGCLAVAGL
501: LLMLLSNGGF GLRGCWYALV GFQWARFSLS LFRLLSRDGV LYSEDTSRYA EKVKAA
Arabidopsis Description
DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.