Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 3
- mitochondrion 1
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400028660 | Potato | endoplasmic reticulum, plasma membrane | 81.55 | 63.48 |
| HORVU3Hr1G027710.1 | Barley | golgi, plasma membrane | 30.1 | 53.14 |
| HORVU5Hr1G040350.2 | Barley | golgi, mitochondrion, plasma membrane | 43.69 | 52.94 |
| HORVU3Hr1G016180.9 | Barley | mitochondrion | 27.83 | 47.78 |
| AT2G38330.1 | Thale cress | plastid | 67.96 | 40.31 |
| CDY07737 | Canola | plastid | 67.96 | 39.4 |
| VIT_08s0058g00510.t01 | Wine grape | plastid | 70.55 | 39.07 |
| Bra000055.1-P | Field mustard | plastid | 64.08 | 38.82 |
| CDY63154 | Canola | plastid | 63.43 | 38.36 |
| KRH49460 | Soybean | plastid | 66.67 | 38.22 |
| GSMUA_Achr11P... | Banana | plastid | 63.43 | 37.84 |
| KXG27560 | Sorghum | plastid | 64.08 | 36.53 |
| TraesCS5A01G151800.2 | Wheat | plastid | 64.72 | 36.23 |
| KXG22777 | Sorghum | plastid | 64.72 | 36.17 |
| TraesCS5D01G157000.2 | Wheat | plastid | 64.72 | 36.17 |
| TraesCS5B01G150400.2 | Wheat | plastid | 64.72 | 36.17 |
| Zm00001d005080_P002 | Maize | plastid | 64.08 | 35.36 |
| Os12t0106600-01 | Rice | plastid | 62.14 | 34.91 |
| TraesCS4D01G131900.1 | Wheat | plastid | 62.14 | 34.91 |
| HORVU4Hr1G024560.27 | Barley | plastid | 62.46 | 34.77 |
| TraesCS4A01G180600.2 | Wheat | plastid | 61.49 | 34.55 |
| KRH00327 | Soybean | plastid | 59.87 | 31.2 |
| Solyc02g061760.2.1 | Tomato | plastid | 49.19 | 27.59 |
| Solyc01g112090.2.1 | Tomato | plastid | 54.05 | 27.47 |
| Solyc11g065820.1.1 | Tomato | cytosol, plasma membrane, vacuole | 44.98 | 27.25 |
| Solyc01g087150.2.1 | Tomato | plasma membrane | 44.34 | 26.1 |
| Solyc01g008420.2.1 | Tomato | plasma membrane | 43.69 | 25.19 |
| Solyc10g054100.1.1 | Tomato | endoplasmic reticulum, vacuole | 4.53 | 20.9 |
| Zm00001d035381_P001 | Maize | plasma membrane | 44.34 | 20.06 |
| Solyc01g110280.2.1 | Tomato | plastid | 22.65 | 12.57 |
| KRH27483 | Soybean | cytosol | 6.47 | 9.17 |
| Solyc10g054110.1.1 | Tomato | plastid | 11.0 | 9.07 |
| Solyc10g085330.1.1 | Tomato | plastid | 2.59 | 3.25 |
Protein Annotations
| EnsemblPlants:Solyc10g085340.1.1 | EnsemblPlantsGene:Solyc10g085340.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | InterPro:MATE_fam | PANTHER:PTHR42893 | PANTHER:PTHR42893:SF1 | PFAM:PF01554 | SEG:seg |
| TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI000276A8B1 | UniProt:K4D3W8 | MapMan:24.2.4.1.3 | : |
Description
No Description!
Coordinates
chr10:+:64550002..64554181
Molecular Weight (calculated)
32430.0 Da
IEP (calculated)
8.397
GRAVY (calculated)
0.817
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAFGAPPVV IALAAQGTFR GFKDTKTPLY AVGAGNLLNA LLSPILIFTF GFGVSGAAIA GVISEYLTAS ILLWKLNGKV LLIAPDVNVG RFPQYLKSGA
101: LLIGRTLALL ITTTLSTALA AREGPVPMAG HQICVEVWLA VSLLTDALAL AGQALLAGGV SQGNYSQARE VVYKVLQIGA LTGVALGFSL FVGFGALSAL
201: FSTDSEVLEI AKSGTLFVAG SQPVNAIAFV LDGLYYGVSD FEFAAYSMFV IGTISSIFLL VAAPLFGLPG VWAGLFLFVA LRVVAGLWRL QTRDGPWKFL
301: RTDMEQDSV
101: LLIGRTLALL ITTTLSTALA AREGPVPMAG HQICVEVWLA VSLLTDALAL AGQALLAGGV SQGNYSQARE VVYKVLQIGA LTGVALGFSL FVGFGALSAL
201: FSTDSEVLEI AKSGTLFVAG SQPVNAIAFV LDGLYYGVSD FEFAAYSMFV IGTISSIFLL VAAPLFGLPG VWAGLFLFVA LRVVAGLWRL QTRDGPWKFL
301: RTDMEQDSV
001: MAAVATSFCF SPHRSPSRFG NPNSSIRRTI VCKSSPRDES PAVSTSSQRP EKQQNPLTSQ NKPDHDHKPD PGIGKIGMEI MSIALPAALA LAADPITSLV
101: DTAFVGHIGS AELAAVGVSV SVFNLVSKLF NVPLLNVTTS FVAEEQAIAA KDDNDSIETS KKVLPSVSTS LVLAAGVGIA EAIALSLGSD FLMDVMAIPF
201: DSPMRIPAEQ FLRLRAYGAP PIVVALAAQG AFRGFKDTTT PLYAVVAGNV LNAVLDPILI FVLGFGISGA AAATVISEYL IAFILLWKLN ENVVLLSPQI
301: KVGRANQYLK SGGLLIGRTV ALLVPFTLAT SLAAQNGPTQ MAGHQIVLEI WLAVSLLTDA LAIAAQSLLA TTYSQGEYKQ AREVLFGVLQ VGLATGTGLA
401: AVLFITFEPF SSLFTTDSEV LKIALSGTLF VAGSQPVNAL AFVLDGLYYG VSDFGFAAYS MVIVGFISSL FMLVAAPTFG LAGIWTGLFL FMALRLVAGA
501: WRLGTRTGPW KMLWSAPEKP E
101: DTAFVGHIGS AELAAVGVSV SVFNLVSKLF NVPLLNVTTS FVAEEQAIAA KDDNDSIETS KKVLPSVSTS LVLAAGVGIA EAIALSLGSD FLMDVMAIPF
201: DSPMRIPAEQ FLRLRAYGAP PIVVALAAQG AFRGFKDTTT PLYAVVAGNV LNAVLDPILI FVLGFGISGA AAATVISEYL IAFILLWKLN ENVVLLSPQI
301: KVGRANQYLK SGGLLIGRTV ALLVPFTLAT SLAAQNGPTQ MAGHQIVLEI WLAVSLLTDA LAIAAQSLLA TTYSQGEYKQ AREVLFGVLQ VGLATGTGLA
401: AVLFITFEPF SSLFTTDSEV LKIALSGTLF VAGSQPVNAL AFVLDGLYYG VSDFGFAAYS MVIVGFISSL FMLVAAPTFG LAGIWTGLFL FMALRLVAGA
501: WRLGTRTGPW KMLWSAPEKP E
Arabidopsis Description
DTX44Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VTF1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.