Factsheet for Os12t0106600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G024560.27	Barley	plastid	77.45	76.76
TraesCS4A01G180600.2	Wheat	plastid	76.18	76.18
TraesCS4D01G131900.1	Wheat	plastid	76.18	76.18
HORVU3Hr1G027710.1	Barley	golgi, plasma membrane	24.0	75.43
HORVU5Hr1G040350.2	Barley	golgi, mitochondrion, plasma membrane	34.36	74.12
TraesCS5B01G150400.2	Wheat	plastid	71.82	71.43
KXG22777	Sorghum	plastid	70.91	70.52
Zm00001d005080_P002	Maize	plastid	69.45	68.21
HORVU3Hr1G016180.9	Barley	mitochondrion	22.0	67.22
Solyc10g085340.1.1	Tomato	golgi, plasma membrane	34.91	62.14
GSMUA_Achr11P...	Banana	plastid	58.18	61.78
PGSC0003DMT400028660	Potato	endoplasmic reticulum, plasma membrane	42.91	59.45
Os01t0162101-00	Rice	endoplasmic reticulum, extracellular	4.0	57.89
AT2G38330.1	Thale cress	plastid	53.45	56.43
Bra000055.1-P	Field mustard	plastid	51.82	55.88
KRH49460	Soybean	plastid	54.36	55.47
CDY63154	Canola	plastid	51.27	55.19
CDY07737	Canola	plastid	53.45	55.16
VIT_08s0058g00510.t01	Wine grape	plastid	55.64	54.84
KRH00327	Soybean	plastid	49.27	45.7
Zm00001d035381_P001	Maize	plasma membrane	54.0	43.48
Os10t0206800-01	Rice	plasma membrane	40.0	40.97
Os09t0548300-01	Rice	plastid	42.36	40.38
Os03t0216700-01	Rice	plasma membrane, vacuole	38.18	36.78
Os01t0919100-01	Rice	cytosol, peroxisome, plasma membrane	39.09	35.95
Solyc10g085330.1.1	Tomato	plastid	15.45	34.55
KRH27483	Soybean	cytosol	12.73	32.11
Os02t0122200-00	Rice	plastid, vacuole	17.64	20.34
Os12t0107500-01	Rice	extracellular	0.73	3.48

Protein Annotations

MapMan:24.2.4.1.3	UniProt:A0A0P0Y6K7	ProteinID:BAT15507.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:MATE_fam	EnsemblPlantsGene:Os12g0106600	EnsemblPlants:Os12t0106600-01	PFAM:PF01554
PANTHER:PTHR42893	PANTHER:PTHR42893:SF1	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI000224D544	SEG:seg

Description

Similar to MATE efflux family protein, expressed. (Os12t0106600-01)

Coordinates

chr12:+:350772..355072

Molecular Weight (calculated)

58378.2 Da

IEP (calculated)

5.139

GRAVY (calculated)

0.557

Length

550 amino acids

Sequence
(BLAST)

001: MTATSPPMRS VAAAALVLTP TPTLNRLSFP FAHRHCPSTA APRWRPARCR GKPAVEDVVH DDEEETWRRE ANPERKDGGE EMLGRGWFMV DEIGMEILTI
101: ALPAVLALAA DPITALIDTA FVGHVGSTEL AAVGVSISIF NLVSKLLNVP LLNVTTSFVA EQQAVDADYN SSVENSHIGE EISISQEKAG EQRKFLPAVS
201: TSLALAAGIG LMETVALILG SGTLLDIVGV PVDSPMRIPA EQFLTLRAYG APPVIVALAA QGAFRGFMDT KTPLFAVVAG NLVNALLDAI FIFPLGLGVS
301: GAALATVTSE YLTAFILLWK LNSKIVLFSW NIVSGDIIRY LKSGALLIAR TIAVVLTFTV STSLAAREGS VPMAGYEICL QVWLTISLLN DALALAGQAL
401: LASEYAKGNY KKARIVLYRV LQIGGVTGAA LSTTLLLGFG YLSMLFTDDA AVLDVAQTGV WFVTVSQPIN AVAFVMDGLY YGVSDFAFVA YSTLFAGAIS
501: SAVLLVAAPK FGLGGVWAGL TLFMSLRAIA GFWRLGSKGG PWKIIWSETE

Best Arabidopsis Sequence Match ( AT2G38330.1 )
(BLAST)

001: MAAVATSFCF SPHRSPSRFG NPNSSIRRTI VCKSSPRDES PAVSTSSQRP EKQQNPLTSQ NKPDHDHKPD PGIGKIGMEI MSIALPAALA LAADPITSLV
101: DTAFVGHIGS AELAAVGVSV SVFNLVSKLF NVPLLNVTTS FVAEEQAIAA KDDNDSIETS KKVLPSVSTS LVLAAGVGIA EAIALSLGSD FLMDVMAIPF
201: DSPMRIPAEQ FLRLRAYGAP PIVVALAAQG AFRGFKDTTT PLYAVVAGNV LNAVLDPILI FVLGFGISGA AAATVISEYL IAFILLWKLN ENVVLLSPQI
301: KVGRANQYLK SGGLLIGRTV ALLVPFTLAT SLAAQNGPTQ MAGHQIVLEI WLAVSLLTDA LAIAAQSLLA TTYSQGEYKQ AREVLFGVLQ VGLATGTGLA
401: AVLFITFEPF SSLFTTDSEV LKIALSGTLF VAGSQPVNAL AFVLDGLYYG VSDFGFAAYS MVIVGFISSL FMLVAAPTFG LAGIWTGLFL FMALRLVAGA
501: WRLGTRTGPW KMLWSAPEKP E

Arabidopsis Description

DTX44Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VTF1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.