Factsheet for HORVU3Hr1G016180.9

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
extracellular 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	endoplasmic reticulum, extracellular, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G040350.2	Barley	golgi, mitochondrion, plasma membrane	65.0	45.88
HORVU3Hr1G027710.1	Barley	golgi, plasma membrane	29.44	30.29
Solyc10g085340.1.1	Tomato	golgi, plasma membrane	47.78	27.83
HORVU4Hr1G024560.27	Barley	plastid	80.56	26.13
TraesCS4A01G180600.2	Wheat	plastid	77.78	25.45
TraesCS4D01G131900.1	Wheat	plastid	77.78	25.45
Os12t0106600-01	Rice	plastid	67.22	22.0
PGSC0003DMT400028660	Potato	endoplasmic reticulum, plasma membrane	46.67	21.16
KXG22777	Sorghum	plastid	65.0	21.16
TraesCS5B01G150400.2	Wheat	plastid	63.89	20.8
Zm00001d005080_P002	Maize	plastid	64.44	20.71
HORVU1Hr1G085680.1	Barley	plasma membrane	32.78	20.0
GSMUA_Achr11P...	Banana	plastid	52.78	18.34
Bra000055.1-P	Field mustard	plastid	51.67	18.24
AT2G38330.1	Thale cress	plastid	52.22	18.04
CDY63154	Canola	plastid	50.56	17.81
CDY07737	Canola	plastid	51.67	17.45
VIT_08s0058g00510.t01	Wine grape	plastid	53.89	17.38
KRH49460	Soybean	plastid	51.11	17.07
KRH00327	Soybean	plastid	51.67	15.68
HORVU1Hr1G068960.15	Barley	plasma membrane	38.33	13.4
HORVU6Hr1G095270.9	Barley	golgi, plasma membrane, plastid	45.0	13.3
HORVU4Hr1G067510.5	Barley	cytosol, peroxisome, plasma membrane	32.78	10.63
Zm00001d035381_P001	Maize	plasma membrane	38.33	10.1
HORVU6Hr1G012070.9	Barley	peroxisome, plastid	18.33	6.53
HORVU6Hr1G041060.5	Barley	extracellular	3.89	5.51
KRH27483	Soybean	cytosol	6.11	5.05
Solyc10g085330.1.1	Tomato	plastid	4.44	3.25
HORVU7Hr1G109470.1	Barley	golgi, plasma membrane, vacuole	2.22	2.68

Protein Annotations

EnsemblPlants:HORVU3Hr1G016180.9	EnsemblPlantsGene:HORVU3Hr1G016180	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR42893
PANTHER:PTHR42893:SF1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B487C2F	UniProt:A0A287K897	MapMan:24.2.4.1.3

Description

No Description!

Coordinates

chrchr3H:-:38756290..38757863

Molecular Weight (calculated)

19726.9 Da

IEP (calculated)

5.789

GRAVY (calculated)

0.655

Length

180 amino acids

Sequence
(BLAST)

001: MRKGTTSRPA WFCTEFCRLR RYYIHSQLLV NFLIFLSFTE QSYADDASIF LQIGGVTGLA LAATLFLGFG YLTLLFTDDP AVLDIAQSGV WFVTITQPIN
101: AIAFVFDGLY YGVSDFGYAA YSTLFAGVVS SAFLLVVAPS FGLGGVWAGL TLFMGLRAIA GFWRLGSKGG PWEIVWSKTD

Best Arabidopsis Sequence Match ( AT2G38330.1 )
(BLAST)

001: MAAVATSFCF SPHRSPSRFG NPNSSIRRTI VCKSSPRDES PAVSTSSQRP EKQQNPLTSQ NKPDHDHKPD PGIGKIGMEI MSIALPAALA LAADPITSLV
101: DTAFVGHIGS AELAAVGVSV SVFNLVSKLF NVPLLNVTTS FVAEEQAIAA KDDNDSIETS KKVLPSVSTS LVLAAGVGIA EAIALSLGSD FLMDVMAIPF
201: DSPMRIPAEQ FLRLRAYGAP PIVVALAAQG AFRGFKDTTT PLYAVVAGNV LNAVLDPILI FVLGFGISGA AAATVISEYL IAFILLWKLN ENVVLLSPQI
301: KVGRANQYLK SGGLLIGRTV ALLVPFTLAT SLAAQNGPTQ MAGHQIVLEI WLAVSLLTDA LAIAAQSLLA TTYSQGEYKQ AREVLFGVLQ VGLATGTGLA
401: AVLFITFEPF SSLFTTDSEV LKIALSGTLF VAGSQPVNAL AFVLDGLYYG VSDFGFAAYS MVIVGFISSL FMLVAAPTFG LAGIWTGLFL FMALRLVAGA
501: WRLGTRTGPW KMLWSAPEKP E

Arabidopsis Description

DTX44Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VTF1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.