Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- golgi 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4B01G322300.1 | Wheat | plasma membrane | 90.17 | 81.6 |
TraesCS6B01G470700.2 | Wheat | plasma membrane | 91.86 | 59.69 |
TraesCS6A01G418800.1 | Wheat | plastid | 90.17 | 47.59 |
TraesCS7D01G031100.1 | Wheat | plastid | 88.81 | 45.8 |
HORVU6Hr1G095270.9 | Barley | golgi, plasma membrane, plastid | 93.9 | 45.48 |
TraesCS6D01G407900.1 | Wheat | plastid | 90.85 | 45.04 |
KXG32398 | Sorghum | plastid | 81.69 | 44.38 |
HORVU6Hr1G041060.5 | Barley | extracellular | 18.98 | 44.09 |
Zm00001d040665_P001 | Maize | plastid | 80.68 | 42.65 |
HORVU3Hr1G027710.1 | Barley | golgi, plasma membrane | 24.07 | 40.57 |
HORVU5Hr1G040350.2 | Barley | golgi, mitochondrion, plasma membrane | 32.88 | 38.04 |
KRH74091 | Soybean | plasma membrane | 60.68 | 34.03 |
HORVU3Hr1G016180.9 | Barley | mitochondrion | 20.0 | 32.78 |
Bra010745.1-P | Field mustard | plastid | 59.66 | 32.77 |
KRH14024 | Soybean | plasma membrane | 61.36 | 32.38 |
Solyc02g061760.2.1 | Tomato | plastid | 60.0 | 32.12 |
AT4G38380.2 | Thale cress | plastid | 58.98 | 31.07 |
PGSC0003DMT400022359 | Potato | plastid | 59.66 | 29.43 |
VIT_03s0038g03200.t01 | Wine grape | plastid | 59.66 | 29.14 |
Solyc01g112090.2.1 | Tomato | plastid | 60.0 | 29.11 |
PGSC0003DMT400047961 | Potato | plastid | 60.34 | 28.9 |
HORVU4Hr1G024560.27 | Barley | plastid | 46.1 | 24.5 |
HORVU1Hr1G068960.15 | Barley | plasma membrane | 42.37 | 24.27 |
HORVU4Hr1G067510.5 | Barley | cytosol, peroxisome, plasma membrane | 41.69 | 22.16 |
CDY12082 | Canola | plastid | 58.98 | 22.14 |
CDX90273 | Canola | plastid | 58.31 | 21.86 |
HORVU6Hr1G012070.9 | Barley | peroxisome, plastid | 20.0 | 11.68 |
HORVU7Hr1G109470.1 | Barley | golgi, plasma membrane, vacuole | 4.41 | 8.72 |
Protein Annotations
EnsemblPlants:HORVU1Hr1G085680.1 | EnsemblPlantsGene:HORVU1Hr1G085680 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 |
GO:GO:0055085 | InterPro:MATE_fam | PANTHER:PTHR42893 | PANTHER:PTHR42893:SF3 | PFAM:PF01554 | SEG:seg |
TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI000B4854DA | UniProt:A0A287GKM2 | MapMan:24.2.4.1.3 | : |
Description
No Description!
Coordinates
chrchr1H:-:536100359..536105393
Molecular Weight (calculated)
31301.1 Da
IEP (calculated)
9.030
GRAVY (calculated)
0.998
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVSLVSPMY TSARLFLSLG ALGAPANVIM LAVQGIFHGF KDTNTPVLFI GLGNLSAVVL LPLLIYGFKL GITGAAISTV ASHYIIAILL MWSLSKRAVL
101: LPPRMDQLEF GGYLKSGFLE LLGRTLSILL TMTIGTSMAA RQGPTAMAAH QICLQVWLAV SLLADALAVS AQALIASSYA VLDYKRVQKA AIFALQIGLV
201: SGLALAVGLY ISFGSIARLF TNDPRVLTVV SYCALFVCAS QPVNALAFIF DGFHYGVSDF DYVAQATIVV AVISSLVLLY APRVFGLAWP EFGLV
101: LPPRMDQLEF GGYLKSGFLE LLGRTLSILL TMTIGTSMAA RQGPTAMAAH QICLQVWLAV SLLADALAVS AQALIASSYA VLDYKRVQKA AIFALQIGLV
201: SGLALAVGLY ISFGSIARLF TNDPRVLTVV SYCALFVCAS QPVNALAFIF DGFHYGVSDF DYVAQATIVV AVISSLVLLY APRVFGLAWP EFGLV
001: MESSRVVVGG GLPLANRRNS SFAKPKIQQG TFLPLSRINN VSAPQKCSLH TNPNPMFPFV TRRKSQTNPD CGVVKLGEED DSCSSLDKLP EVNGVHTGVA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASEDSQS DIPSQGLPER
201: KQLSSVSTAL VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY
301: KFRMGVAGAA ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL
401: ASSGQALIAS SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM
501: MVVGGISSAF MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASEDSQS DIPSQGLPER
201: KQLSSVSTAL VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY
301: KFRMGVAGAA ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL
401: ASSGQALIAS SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM
501: MVVGGISSAF MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA
Arabidopsis Description
DTX45Protein DETOXIFICATION 45, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.