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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 1
  • plasma membrane 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 3
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G322300.1 Wheat plasma membrane 90.17 81.6
TraesCS6B01G470700.2 Wheat plasma membrane 91.86 59.69
TraesCS6A01G418800.1 Wheat plastid 90.17 47.59
TraesCS7D01G031100.1 Wheat plastid 88.81 45.8
HORVU6Hr1G095270.9 Barley golgi, plasma membrane, plastid 93.9 45.48
TraesCS6D01G407900.1 Wheat plastid 90.85 45.04
KXG32398 Sorghum plastid 81.69 44.38
HORVU6Hr1G041060.5 Barley extracellular 18.98 44.09
Zm00001d040665_P001 Maize plastid 80.68 42.65
HORVU3Hr1G027710.1 Barley golgi, plasma membrane 24.07 40.57
HORVU5Hr1G040350.2 Barley golgi, mitochondrion, plasma membrane 32.88 38.04
KRH74091 Soybean plasma membrane 60.68 34.03
HORVU3Hr1G016180.9 Barley mitochondrion 20.0 32.78
Bra010745.1-P Field mustard plastid 59.66 32.77
KRH14024 Soybean plasma membrane 61.36 32.38
Solyc02g061760.2.1 Tomato plastid 60.0 32.12
AT4G38380.2 Thale cress plastid 58.98 31.07
PGSC0003DMT400022359 Potato plastid 59.66 29.43
VIT_03s0038g03200.t01 Wine grape plastid 59.66 29.14
Solyc01g112090.2.1 Tomato plastid 60.0 29.11
PGSC0003DMT400047961 Potato plastid 60.34 28.9
HORVU4Hr1G024560.27 Barley plastid 46.1 24.5
HORVU1Hr1G068960.15 Barley plasma membrane 42.37 24.27
HORVU4Hr1G067510.5 Barley cytosol, peroxisome, plasma membrane 41.69 22.16
CDY12082 Canola plastid 58.98 22.14
CDX90273 Canola plastid 58.31 21.86
HORVU6Hr1G012070.9 Barley peroxisome, plastid 20.0 11.68
HORVU7Hr1G109470.1 Barley golgi, plasma membrane, vacuole 4.41 8.72
Protein Annotations
EnsemblPlants:HORVU1Hr1G085680.1EnsemblPlantsGene:HORVU1Hr1G085680GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR42893PANTHER:PTHR42893:SF3PFAM:PF01554SEG:seg
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000B4854DAUniProt:A0A287GKM2MapMan:24.2.4.1.3:
Description
No Description!
Coordinates
chrchr1H:-:536100359..536105393
Molecular Weight (calculated)
31301.1 Da
IEP (calculated)
9.030
GRAVY (calculated)
0.998
Length
295 amino acids
Sequence
(BLAST)
001: MGVSLVSPMY TSARLFLSLG ALGAPANVIM LAVQGIFHGF KDTNTPVLFI GLGNLSAVVL LPLLIYGFKL GITGAAISTV ASHYIIAILL MWSLSKRAVL
101: LPPRMDQLEF GGYLKSGFLE LLGRTLSILL TMTIGTSMAA RQGPTAMAAH QICLQVWLAV SLLADALAVS AQALIASSYA VLDYKRVQKA AIFALQIGLV
201: SGLALAVGLY ISFGSIARLF TNDPRVLTVV SYCALFVCAS QPVNALAFIF DGFHYGVSDF DYVAQATIVV AVISSLVLLY APRVFGLAWP EFGLV
Best Arabidopsis Sequence Match ( AT4G38380.1 )
(BLAST)
001: MESSRVVVGG GLPLANRRNS SFAKPKIQQG TFLPLSRINN VSAPQKCSLH TNPNPMFPFV TRRKSQTNPD CGVVKLGEED DSCSSLDKLP EVNGVHTGVA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASEDSQS DIPSQGLPER
201: KQLSSVSTAL VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY
301: KFRMGVAGAA ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL
401: ASSGQALIAS SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM
501: MVVGGISSAF MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA
Arabidopsis Description
DTX45Protein DETOXIFICATION 45, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.