CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040665_P001	Maize	plastid	89.13	86.74
TraesCS4B01G322300.1	Wheat	plasma membrane	50.64	84.36
HORVU1Hr1G085680.1	Barley	plasma membrane	44.38	81.69
TraesCS6B01G470700.2	Wheat	plasma membrane	67.77	81.06
HORVU7Hr1G109470.1	Barley	golgi, plasma membrane, vacuole	20.26	73.83
TraesCS6A01G418800.1	Wheat	plastid	74.03	71.91
TraesCS7D01G031100.1	Wheat	plastid	72.19	68.53
TraesCS6D01G407900.1	Wheat	plastid	73.85	67.39
HORVU6Hr1G095270.9	Barley	golgi, plasma membrane, plastid	74.95	66.83
KRH74091	Soybean	plasma membrane	51.93	53.61
Solyc02g061760.2.1	Tomato	plastid	52.12	51.36
KXG36122	Sorghum	mitochondrion, plasma membrane	54.7	50.94
KRH14024	Soybean	plasma membrane	52.12	50.63
Bra010745.1-P	Field mustard	plastid	48.25	48.79
AT4G38380.2	Thale cress	plastid	50.09	48.57
VIT_03s0038g03200.t01	Wine grape	plastid	53.96	48.51
Solyc01g112090.2.1	Tomato	plastid	53.04	47.37
PGSC0003DMT400047961	Potato	plastid	53.04	46.75
PGSC0003DMT400022359	Potato	plastid	50.83	46.15
HORVU6Hr1G041060.5	Barley	extracellular	10.31	44.09
KXG27560	Sorghum	plastid	40.7	40.77
KXG22777	Sorghum	plastid	39.41	38.7
EES14441	Sorghum	plasma membrane	35.54	36.76
CDY12082	Canola	plastid	49.54	34.22
CDX90273	Canola	plastid	49.36	34.05
EER92636	Sorghum	cytosol, peroxisome, vacuole	35.17	33.81
OQU88105	Sorghum	cytosol, peroxisome, plasma membrane	35.36	32.0
OQU84246	Sorghum	plasma membrane	16.76	21.46

Protein Annotations

MapMan:24.2.4.1.3	UniProt:A0A1B6Q395	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlants:KXG32398	ProteinID:KXG32398	ProteinID:KXG32398.1	ProteinID:KXG32399.1	InterPro:MATE_fam
PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF3	EnsemblPlantsGene:SORBI_3003G149300	TIGRFAMs:TIGR00797	TMHMM:TMhelix
UniParc:UPI00022070D7	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:15756157..15763452

Molecular Weight (calculated)

57276.2 Da

IEP (calculated)

9.601

GRAVY (calculated)

0.675

Length

543 amino acids

Sequence
(BLAST)

001: MLHLHHHSPL VSRHGAVCPP TRLACSCICN KANSRITAAQ STNNNANLLL LRGWSSTRRR ITTVASGQSV PGYTPDDGDQ CLETGNKISF TTVKDAVISL
101: NSVGVRSELI LLALPAVLGQ AIDPMAQLME TAYIGRLGAL ELASAGIGIS IFNIVSKIFN IPLLSIATSF VAEDISRSAT KHPSSGKLEL TSVSSALILA
201: AGIGIMEALA LFLGSGLFLK LMGVSPVSPM HRPAKLFLSL RALGAPANVL MLAVQGIFRG FKDTKTPVFY IGLGNLSAVA LLPLLIYGFQ LGITGAAIST
301: VVSQYIITVL LLRSLSKKAV LLPPGIDQLE FGGYLKSGGM LLGRTLSILL TMTIGTSMAA RQGPTAMAAH QICLQVWLAV SLLADSLAVS AQALIASSYA
401: ILDYKRVQKI TMFALQIGVF SGLALAIGLY ASFGNIARLF TSDPEVLMVV KSCALFVCAS QPINALAFIF DGLLYGVSDF DYVAQATIAV GVTSSLVLLW
501: APSIFGLAGV WAGLTTLMGL RMAAGILRLL WKSGPWSFLH EEP

Best Arabidopsis Sequence Match ( AT4G38380.5 )
(BLAST)

001: MESSRVVVGG GLPLANRRNS SFAKPKIQQG TFLPLSRINN VSAPQKCSLH TNPNPMFPFV TRRKSQTNPD CGVVKLGEED DSCSSLDKLP EVNGVHTGVA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASGLPER KQLSSVSTAL
201: VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY KFRMGVAGAA
301: ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL ASSGQALIAS
401: SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM MVVGGISSAF
501: MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA

Arabidopsis Description

DTX45Protein DETOXIFICATION 45, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.