CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 3
mitochondrion 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021446_P002	Maize	plastid	87.48	88.08
Os09t0548300-01	Rice	plastid	78.9	79.72
GSMUA_AchrUn_...	Banana	plasma membrane	25.21	66.52
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	28.99	61.9
KXG32398	Sorghum	plastid	50.94	54.7
KRH74091	Soybean	plasma membrane	48.89	54.18
Bra010745.1-P	Field mustard	plastid	47.51	51.58
AT4G38380.2	Thale cress	plastid	49.23	51.25
KRH14024	Soybean	plasma membrane	47.68	49.73
VIT_03s0038g03200.t01	Wine grape	plastid	51.29	49.5
Solyc02g061760.2.1	Tomato	plastid	46.48	49.18
Solyc01g112090.2.1	Tomato	plastid	49.06	47.04
PGSC0003DMT400047961	Potato	plastid	49.23	46.59
PGSC0003DMT400022359	Potato	plastid	45.97	44.82
KXG27560	Sorghum	plastid	39.62	42.62
KXG22777	Sorghum	plastid	37.39	39.42
EES14441	Sorghum	plasma membrane	33.62	37.33
CDY12082	Canola	plastid	48.71	36.13
CDX90273	Canola	plastid	48.37	35.83
EER92636	Sorghum	cytosol, peroxisome, vacuole	33.28	34.34
OQU88105	Sorghum	cytosol, peroxisome, plasma membrane	33.28	32.33
OQU84246	Sorghum	plasma membrane	16.98	23.35

Protein Annotations

MapMan:24.2.4.1.3	UniProt:A0A1B6QDY2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlants:KXG36122	ProteinID:KXG36122	ProteinID:KXG36122.1	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR42893	PANTHER:PTHR42893:SF3	EnsemblPlantsGene:SORBI_3002G286800	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI00081AC410
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:66645487..66651170

Molecular Weight (calculated)

60949.5 Da

IEP (calculated)

10.756

GRAVY (calculated)

0.559

Length

583 amino acids

Sequence
(BLAST)

001: MEFAAGAGVA PRLRLRSLPA GPVPGRSGRV MVGGGGAIGI GWARRATAPG LSLAPAVARR AVSAAGGGHL LHGRVVVRST GDGGGRVGFR GEDAEGDRSP
101: AARASPLDGA KGATPAPNVV RDHPGGIRKD LMNLAVPAIV GQAIDPVAQL LETAYVGRLG PVELGSAAVG MSVFNIISKL FNIPLLSITT SFVAEDVSKH
201: DSSKSASGNI SDKIGERKRL PSISSALLLA AAIGVIEALA LILGSGILLN IMGVSHASAM HNPARLFLSV RALGAPAVVV SLAIQGVFRG LKDTKTPLLY
301: SGLGNISAVV LLPFFVYYLN LGLTGAALAT IASQYVGMFL LLWSLSKRAV LLPPKIKDLE FVGYIKSGGM LLGRTLSVLI TMTLGTAMAA RQGTVAMAAH
401: QICLQVWLAV SLLSDALAVS AQALIASSFA KLDYEKVEEV TFYVLKAGVF VGIALALLLF ASFGRLAEVF SKDPMVIQIV RGGVLFVSAS QPINALAFIF
501: DGLHFGVSDF SYSASSMMVV GAISSLFLLY APQFFGLPGV WAGLALFMSL RMTAGFMRLG WRAGPWWFLH KKEPKYKLQS RKC

Best Arabidopsis Sequence Match ( AT4G38380.5 )
(BLAST)

001: MESSRVVVGG GLPLANRRNS SFAKPKIQQG TFLPLSRINN VSAPQKCSLH TNPNPMFPFV TRRKSQTNPD CGVVKLGEED DSCSSLDKLP EVNGVHTGVA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASGLPER KQLSSVSTAL
201: VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY KFRMGVAGAA
301: ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL ASSGQALIAS
401: SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM MVVGGISSAF
501: MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA

Arabidopsis Description

DTX45Protein DETOXIFICATION 45, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.