Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G322300.1 | Wheat | plasma membrane | 67.84 | 94.48 |
| HORVU1Hr1G085680.1 | Barley | plasma membrane | 59.69 | 91.86 |
| TraesCS6A01G418800.1 | Wheat | plastid | 91.63 | 74.42 |
| HORVU7Hr1G109470.1 | Barley | golgi, plasma membrane, vacuole | 23.35 | 71.14 |
| TraesCS6D01G407900.1 | Wheat | plastid | 92.07 | 70.25 |
| HORVU6Hr1G095270.9 | Barley | golgi, plasma membrane, plastid | 91.63 | 68.31 |
| KXG32398 | Sorghum | plastid | 81.06 | 67.77 |
| Zm00001d040665_P001 | Maize | plastid | 78.85 | 64.16 |
| KRH74091 | Soybean | plasma membrane | 59.25 | 51.14 |
| Solyc02g061760.2.1 | Tomato | plastid | 60.13 | 49.55 |
| KRH14024 | Soybean | plasma membrane | 59.47 | 48.3 |
| AT4G38380.2 | Thale cress | plastid | 57.93 | 46.96 |
| Bra010745.1-P | Field mustard | plastid | 55.51 | 46.93 |
| VIT_03s0038g03200.t01 | Wine grape | plastid | 59.69 | 44.87 |
| Solyc01g112090.2.1 | Tomato | plastid | 59.69 | 44.57 |
| PGSC0003DMT400022359 | Potato | plastid | 58.59 | 44.48 |
| PGSC0003DMT400047961 | Potato | plastid | 59.69 | 43.99 |
| TraesCS5B01G150400.2 | Wheat | plastid | 44.05 | 36.17 |
| TraesCS1B01G315900.1 | Wheat | plasma membrane | 38.77 | 35.41 |
| CDY12082 | Canola | plastid | 57.71 | 33.33 |
| CDX90273 | Canola | plastid | 57.05 | 32.91 |
| TraesCS4B01G244400.1 | Wheat | cytosol, plasma membrane, vacuole | 37.89 | 31.1 |
| TraesCS6B01G090100.1 | Wheat | plasma membrane | 19.6 | 17.35 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G470700.2 | EnsemblPlantsGene:TraesCS6B01G470700 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:MATE_fam | PANTHER:PTHR42893 | PANTHER:PTHR42893:SF3 | PFAM:PF01554 | SEG:seg | TIGR:cd13136 |
| TIGRFAMs:TIGR00797 | TMHMM:TMhelix | MapMan:24.2.4.1.3 | : | : | : |
Description
No Description!
Coordinates
chr6B:+:718770273..718775238
Molecular Weight (calculated)
47541.5 Da
IEP (calculated)
9.801
GRAVY (calculated)
0.858
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQLMETAYI GKLGALELAS AGIGVAIFNI LSKIFNIPLL SIATSFVAED ISKNASKHST SGKLELPSVS SALVLAAAIG TIEALALFLG SGLFLKLMGV
101: SPVSPMYTSA RLFLSLRALG APANVIMLAV QGIFRGFKDT KTPVLFIGLG NLSAVVLLPL LIYGFKLGIT GAAISTVASQ YIIAILLMWS LSKRAVLLPP
201: KMDQLEFGGY LKSGGMLLGR TLSILLTMTI GTSMAARQGP TAMAAHQICL QVWLAVSLLA DALAVSAQAL IASSYAILDY KRVQKVAMFA LQIGLASGLA
301: LAVGLYISFG SIAKLFTNDP QVLAVVSSCA LFVCASQPVN ALAFIFDGLH YGVSDFDYVA QATIVVGVIS SLVLLYAPRV FGLAGVWAGL TTLMGLRMAA
401: GILRLLWKSG PWSFLHEEPA ETKAGPGVFE SNITVAGAAL CIIRIRGEPA HVRS
101: SPVSPMYTSA RLFLSLRALG APANVIMLAV QGIFRGFKDT KTPVLFIGLG NLSAVVLLPL LIYGFKLGIT GAAISTVASQ YIIAILLMWS LSKRAVLLPP
201: KMDQLEFGGY LKSGGMLLGR TLSILLTMTI GTSMAARQGP TAMAAHQICL QVWLAVSLLA DALAVSAQAL IASSYAILDY KRVQKVAMFA LQIGLASGLA
301: LAVGLYISFG SIAKLFTNDP QVLAVVSSCA LFVCASQPVN ALAFIFDGLH YGVSDFDYVA QATIVVGVIS SLVLLYAPRV FGLAGVWAGL TTLMGLRMAA
401: GILRLLWKSG PWSFLHEEPA ETKAGPGVFE SNITVAGAAL CIIRIRGEPA HVRS
001: MESSRVVVGG GLPLANRRNS SFAKPKIQQG TFLPLSRINN VSAPQKCSLH TNPNPMFPFV TRRKSQTNPD CGVVKLGEED DSCSSLDKLP EVNGVHTGVA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASEDSQS DIPSQGLPER
201: KQLSSVSTAL VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY
301: KFRMGVAGAA ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL
401: ASSGQALIAS SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM
501: MVVGGISSAF MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASEDSQS DIPSQGLPER
201: KQLSSVSTAL VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY
301: KFRMGVAGAA ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL
401: ASSGQALIAS SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM
501: MVVGGISSAF MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA
Arabidopsis Description
DTX45Protein DETOXIFICATION 45, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.