Factsheet for HORVU6Hr1G041060.5

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 1
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G085680.1	Barley	plasma membrane	44.09	18.98
KXG32398	Sorghum	plastid	44.09	10.31
HORVU6Hr1G095270.9	Barley	golgi, plasma membrane, plastid	48.03	10.02
KRH74091	Soybean	plasma membrane	37.8	9.13
KRH14024	Soybean	plasma membrane	38.58	8.77
Solyc02g061760.2.1	Tomato	plastid	37.01	8.53
Zm00001d040665_P001	Maize	plastid	36.22	8.24
Bra010745.1-P	Field mustard	plastid	33.07	7.82
PGSC0003DMT400022359	Potato	plastid	36.22	7.69
AT4G38380.2	Thale cress	plastid	33.07	7.5
VIT_03s0038g03200.t01	Wine grape	plastid	35.43	7.45
Solyc01g112090.2.1	Tomato	plastid	34.65	7.24
PGSC0003DMT400047961	Potato	plastid	33.86	6.98
HORVU1Hr1G068960.15	Barley	plasma membrane	25.2	6.21
HORVU4Hr1G067510.5	Barley	cytosol, peroxisome, plasma membrane	26.77	6.13
HORVU4Hr1G024560.27	Barley	plastid	25.98	5.95
CDY12082	Canola	plastid	33.86	5.47
CDX90273	Canola	plastid	33.86	5.46
HORVU3Hr1G027710.1	Barley	golgi, plasma membrane	6.3	4.57
HORVU6Hr1G012070.9	Barley	peroxisome, plastid	17.32	4.36
HORVU3Hr1G016180.9	Barley	mitochondrion	5.51	3.89
HORVU5Hr1G040350.2	Barley	golgi, mitochondrion, plasma membrane	7.09	3.53
HORVU7Hr1G109470.1	Barley	golgi, plasma membrane, vacuole	1.57	1.34

Protein Annotations

EnsemblPlants:HORVU6Hr1G041060.5	EnsemblPlantsGene:HORVU6Hr1G041060	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR42893
PANTHER:PTHR42893:SF3	TMHMM:TMhelix	UniParc:UPI000B473649	UniProt:A0A287U149	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr6H:-:224033457..224036927

Molecular Weight (calculated)

14141.6 Da

IEP (calculated)

7.504

GRAVY (calculated)

0.694

Length

127 amino acids

Sequence
(BLAST)

001: MLAVQGIFRA FKDTKTLVLF IGLGNLSVVV LLPLLIYGFK LGITGAVIST VASQCTQPID AHGRDDSLAF MDQPTCNHGP YCLVDHLVFR VFWSLHFVHV
101: DTNLCVLDHM KSLIVTNRPY LFVTCVF

Best Arabidopsis Sequence Match ( AT4G38380.1 )
(BLAST)

001: MESSRVVVGG GLPLANRRNS SFAKPKIQQG TFLPLSRINN VSAPQKCSLH TNPNPMFPFV TRRKSQTNPD CGVVKLGEED DSCSSLDKLP EVNGVHTGVA
101: RPVDIKRELV MLSLPAIAGQ AIDPLTLLME TAYIGRLGSV ELGSAGVSMA IFNTISKLFN IPLLSVATSF VAEDIAKIAA QDLASEDSQS DIPSQGLPER
201: KQLSSVSTAL VLAIGIGIFE ALALSLASGP FLRLMGIQSM SEMFIPARQF LVLRALGAPA YVVSLALQGI FRGFKDTKTP VYCLGIGNFL AVFLFPLFIY
301: KFRMGVAGAA ISSVISQYTV AILMLILLNK RVILLPPKIG SLKFGDYLKS GGFVLGRTLS VLVTMTVATS MAARQGVFAM AAHQICMQVW LAVSLLTDAL
401: ASSGQALIAS SASKRDFEGV KEVTTFVLKI GVVTGIALAI VLGMSFSSIA GLFSKDPEVL RIVRKGVLFV AATQPITALA FIFDGLHYGM SDFPYAACSM
501: MVVGGISSAF MLYAPAGLGL SGVWVGLSMF MGLRMVAGFS RLMWRKGPWW FMHTSDKRLA

Arabidopsis Description

DTX45Protein DETOXIFICATION 45, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.