Factsheet for TraesCS5D01G157000.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G151800.2	Wheat	plastid	97.83	98.01
TraesCS5B01G150400.2	Wheat	plastid	96.75	96.75
KXG27560	Sorghum	plastid	75.95	77.49
TraesCS4D01G131900.1	Wheat	plastid	70.34	70.73
Solyc10g085340.1.1	Tomato	golgi, plasma membrane	36.17	64.72
GSMUA_Achr11P...	Banana	plastid	59.86	63.9
PGSC0003DMT400028660	Potato	endoplasmic reticulum, plasma membrane	44.48	61.96
AT2G38330.1	Thale cress	plastid	54.43	57.77
Bra000055.1-P	Field mustard	plastid	52.98	57.45
CDY63154	Canola	plastid	52.44	56.75
CDY07737	Canola	plastid	54.61	56.66
VIT_08s0058g00510.t01	Wine grape	plastid	56.96	56.45
KRH49460	Soybean	plastid	54.61	56.03
KRH00327	Soybean	plastid	49.91	46.54
TraesCS1D01G304800.1	Wheat	plasma membrane	37.07	41.25
TraesCS4D01G245000.1	Wheat	plasma membrane	37.79	37.79
TraesCS6D01G407900.1	Wheat	plastid	39.42	36.64
TraesCS7D01G031100.1	Wheat	plastid	37.79	36.54
Solyc10g085330.1.1	Tomato	plastid	16.09	36.18
KRH27483	Soybean	cytosol	12.3	31.19

Protein Annotations

EnsemblPlants:TraesCS5D01G157000.2	EnsemblPlantsGene:TraesCS5D01G157000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0055085
InterPro:MATE_fam	PANTHER:PTHR42893	PANTHER:PTHR42893:SF1	PFAM:PF01554	SEG:seg	TIGR:cd13136
TIGRFAMs:TIGR00797	TMHMM:TMhelix	MapMan:24.2.4.1.3	:	:	:

Description

No Description!

Coordinates

chr5D:-:244701595..244705069

Molecular Weight (calculated)

58677.8 Da

IEP (calculated)

8.441

GRAVY (calculated)

0.456

Length

553 amino acids

Sequence
(BLAST)

001: MAATSPAPTR AAAALTLAPH RRVHHVHMPS GRPCPCRTSA SPRRRTPRCR AKPTVKGVVD DDEDASRESD PERKEEEEAM TATGTLPGWL RLDTVGMDIL
101: SIAAPAVLAL AADPIAALVD TAFVGHIGST ELAAVGVSIS IFNLVSKLFN VPLLNVTTSF VAEQQAVDDS YRGTGENEFR RFPDNKLTEE RKFLPAVTTS
201: LALASGIGLM ETVALIFGSG TLMDFIGIPV DSPVRIPAEQ FLTFRAYGAP PIIVALAAQG AFRGLMDTKT PLYAIGVGNL VNAILDAIFV FPLGLGVRGA
301: ALATVTSEYV IACILLWKLN SKVVIFSGKI IGGGMIRYLK SGGLLIGRTI AVLLTMTLST SLAAREGPVP MAGHQLCLQV WLTISLLNDA LALAGQALLA
401: TEYTKRNYKQ ARMVLYRVLQ IGGVTGTALA IILFFGFGSF SSLFTDDPAV LGIAKSGVWF VAISQPINAV AFVVDGLYYG VSDFAYAAYS MFFAGAISSA
501: FLLVAAPEFG LGGVWAGLIL FMSLRAVAGL WRLGSKGGPW NSILSETDLR DKM

Best Arabidopsis Sequence Match ( AT2G38330.1 )
(BLAST)

001: MAAVATSFCF SPHRSPSRFG NPNSSIRRTI VCKSSPRDES PAVSTSSQRP EKQQNPLTSQ NKPDHDHKPD PGIGKIGMEI MSIALPAALA LAADPITSLV
101: DTAFVGHIGS AELAAVGVSV SVFNLVSKLF NVPLLNVTTS FVAEEQAIAA KDDNDSIETS KKVLPSVSTS LVLAAGVGIA EAIALSLGSD FLMDVMAIPF
201: DSPMRIPAEQ FLRLRAYGAP PIVVALAAQG AFRGFKDTTT PLYAVVAGNV LNAVLDPILI FVLGFGISGA AAATVISEYL IAFILLWKLN ENVVLLSPQI
301: KVGRANQYLK SGGLLIGRTV ALLVPFTLAT SLAAQNGPTQ MAGHQIVLEI WLAVSLLTDA LAIAAQSLLA TTYSQGEYKQ AREVLFGVLQ VGLATGTGLA
401: AVLFITFEPF SSLFTTDSEV LKIALSGTLF VAGSQPVNAL AFVLDGLYYG VSDFGFAAYS MVIVGFISSL FMLVAAPTFG LAGIWTGLFL FMALRLVAGA
501: WRLGTRTGPW KMLWSAPEKP E

Arabidopsis Description

DTX44Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VTF1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.