Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G066800.1 | Wheat | cytosol, plasma membrane, vacuole | 98.92 | 98.92 |
| TraesCS4B01G244400.1 | Wheat | cytosol, plasma membrane, vacuole | 98.73 | 98.73 |
| HORVU4Hr1G067510.5 | Barley | cytosol, peroxisome, plasma membrane | 95.12 | 94.77 |
| Os03t0216700-01 | Rice | plasma membrane, vacuole | 86.8 | 84.06 |
| EER92636 | Sorghum | cytosol, peroxisome, vacuole | 83.91 | 82.12 |
| Zm00001d028228_P001 | Maize | cytosol, plasma membrane, vacuole | 79.57 | 79.57 |
| GSMUA_Achr8P31410_001 | Banana | cytosol, peroxisome, plasma membrane | 66.55 | 74.64 |
| TraesCS1D01G304800.1 | Wheat | plasma membrane | 51.54 | 57.34 |
| TraesCS4D01G131900.1 | Wheat | plastid | 37.79 | 38.0 |
| TraesCS5D01G157000.2 | Wheat | plastid | 37.79 | 37.79 |
| TraesCS7D01G031100.1 | Wheat | plastid | 32.01 | 30.94 |
| TraesCS6D01G407900.1 | Wheat | plastid | 33.09 | 30.76 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G245000.1 | EnsemblPlantsGene:TraesCS4D01G245000 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:MATE_fam | PANTHER:PTHR42893 | PANTHER:PTHR42893:SF5 | PFAM:PF01554 | SEG:seg | TIGR:cd13136 |
| TIGRFAMs:TIGR00797 | TMHMM:TMhelix | MapMan:24.2.4.1.3 | MapMan:25.4.6.1 | : | : |
Description
No Description!
Coordinates
chr4D:-:409641016..409644891
Molecular Weight (calculated)
58146.6 Da
IEP (calculated)
7.600
GRAVY (calculated)
0.659
Length
553 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEGAAASMT VGEKRVAVDV PTDAAAAANG HGPEEKAAED VPAPSALSGW PRTTGMYLFV MNIRSVFKLD ELGSEVLRIA VPASLALAAD PLASLVDTAF
101: IGRLGSVEIA AVGVSIAIFN QVSKVCIYPL VSVTTSFVAE EDAIISKYLE ENNSKDLEKA AHVHSDACNV PASGGDTPVC ANSCIPTECA DLSNQGCKRR
201: YIPSVTSALI VGSFLGLVQA VFLIFSAKVV LGIMGVKHDS PMLEPAVRYL TIRSLGAPAV LLSLAMQGVF RGFKDTKTPL YATVVGDATN IILDPILMFV
301: CHMGVTGAAV AHVISQYLIT MILICRLVQQ VDVIPPSLKS LKFGRFLGCG FLLLARVVAV TFCVTLASSL AARDGPTIMA AFQICCQLWL ATSLLADGLA
401: VAGQAVLASA FAKNDTKKVI AATSRVLQLS IVLGMGLTVV LGLFMKFGAG VFTKDAAVID VIHKGIPFVA GTQTINALAF VFDGINFGAQ DYTYSAYSMV
501: GVASISIPCL VYLSAHKGFI GIWVALTIYM SLRTVASTWR MGAASGPWAF LRK
101: IGRLGSVEIA AVGVSIAIFN QVSKVCIYPL VSVTTSFVAE EDAIISKYLE ENNSKDLEKA AHVHSDACNV PASGGDTPVC ANSCIPTECA DLSNQGCKRR
201: YIPSVTSALI VGSFLGLVQA VFLIFSAKVV LGIMGVKHDS PMLEPAVRYL TIRSLGAPAV LLSLAMQGVF RGFKDTKTPL YATVVGDATN IILDPILMFV
301: CHMGVTGAAV AHVISQYLIT MILICRLVQQ VDVIPPSLKS LKFGRFLGCG FLLLARVVAV TFCVTLASSL AARDGPTIMA AFQICCQLWL ATSLLADGLA
401: VAGQAVLASA FAKNDTKKVI AATSRVLQLS IVLGMGLTVV LGLFMKFGAG VFTKDAAVID VIHKGIPFVA GTQTINALAF VFDGINFGAQ DYTYSAYSMV
501: GVASISIPCL VYLSAHKGFI GIWVALTIYM SLRTVASTWR MGAASGPWAF LRK
001: MMSEDGYNTD FPRNPLYIFF SDFRSVLKFD ELGLEIARIA LPAALALTAD PIASLVDTAF IGQIGPVELA AVGVSIALFN QVSRIAIFPL VSITTSFVAE
101: EDACSSQQDT VRDHKECIEI GINNPTEETI ELIPEKHKDS LSDEFKTSSS IFSISKPPAK KRNIPSASSA LIIGGVLGLF QAVFLISAAK PLLSFMGVKH
201: DSPMMRPSQR YLSLRSLGAP AVLLSLAAQG VFRGFKDTTT PLFATVIGDV TNIILDPIFI FVFRLGVTGA ATAHVISQYL MCGILLWKLM GQVDIFNMST
301: KHLQFCRFMK NGFLLLMRVI AVTFCVTLSA SLAAREGSTS MAAFQVCLQV WLATSLLADG YAVAGQAILA SAFAKKDYKR AAATASRVLQ LGLVLGFVLA
401: VILGAGLHFG ARVFTKDDKV LHLISIGLPF VAGTQPINAL AFVFDGVNFG ASDFGYAAAS LVMVAIVSIL CLLFLSSTHG FIGLWFGLTI YMSLRAAVGF
501: WRIGTGTGPW SFLRS
101: EDACSSQQDT VRDHKECIEI GINNPTEETI ELIPEKHKDS LSDEFKTSSS IFSISKPPAK KRNIPSASSA LIIGGVLGLF QAVFLISAAK PLLSFMGVKH
201: DSPMMRPSQR YLSLRSLGAP AVLLSLAAQG VFRGFKDTTT PLFATVIGDV TNIILDPIFI FVFRLGVTGA ATAHVISQYL MCGILLWKLM GQVDIFNMST
301: KHLQFCRFMK NGFLLLMRVI AVTFCVTLSA SLAAREGSTS MAAFQVCLQV WLATSLLADG YAVAGQAILA SAFAKKDYKR AAATASRVLQ LGLVLGFVLA
401: VILGAGLHFG ARVFTKDDKV LHLISIGLPF VAGTQPINAL AFVFDGVNFG ASDFGYAAAS LVMVAIVSIL CLLFLSSTHG FIGLWFGLTI YMSLRAAVGF
501: WRIGTGTGPW SFLRS
Arabidopsis Description
DTX42Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W9H8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.