Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G117300.1 | Wheat | plastid | 98.31 | 98.31 |
| TraesCS6B01G090100.1 | Wheat | plasma membrane | 91.76 | 95.52 |
| HORVU6Hr1G012070.9 | Barley | peroxisome, plastid | 86.52 | 91.49 |
| OQU84246 | Sorghum | plasma membrane | 68.73 | 86.56 |
| Os02t0122200-00 | Rice | plastid, vacuole | 73.41 | 82.18 |
| Zm00001d015060_P001 | Maize | plastid | 78.28 | 76.7 |
| GSMUA_Achr1P16310_001 | Banana | plasma membrane | 55.81 | 70.28 |
| CDY65815 | Canola | plasma membrane | 53.0 | 64.17 |
| VIT_03s0038g00410.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 56.93 | 59.73 |
| CDX83192 | Canola | plastid | 55.81 | 55.6 |
| Bra031182.1-P | Field mustard | plastid | 56.74 | 54.89 |
| CDX82020 | Canola | plastid | 56.93 | 54.77 |
| KRH29367 | Soybean | plastid | 55.99 | 54.56 |
| KRH29368 | Soybean | plastid | 55.62 | 54.4 |
| AT2G21340.1 | Thale cress | plastid | 56.93 | 54.38 |
| PGSC0003DMT400008778 | Potato | plastid | 54.31 | 53.31 |
| PGSC0003DMT400008058 | Potato | plastid | 55.06 | 52.78 |
| Bra000583.1-P | Field mustard | plastid | 50.56 | 52.43 |
| VIT_03s0038g00430.t01 | Wine grape | plastid | 55.43 | 52.2 |
| AT4G39030.1 | Thale cress | mitochondrion | 52.62 | 51.75 |
| CDY42600 | Canola | mitochondrion | 51.87 | 51.68 |
| Solyc01g110280.2.1 | Tomato | plastid | 53.75 | 51.53 |
| CDY41956 | Canola | mitochondrion | 51.69 | 51.49 |
| Bra011880.1-P | Field mustard | mitochondrion | 51.69 | 51.3 |
| PGSC0003DMT400008050 | Potato | mitochondrion, plasma membrane, plastid, vacuole | 45.69 | 51.05 |
| KRH24389 | Soybean | extracellular | 9.18 | 41.18 |
| TraesCS5A01G151800.2 | Wheat | plastid | 20.97 | 20.29 |
| TraesCS1A01G305200.1 | Wheat | plasma membrane | 18.16 | 19.52 |
| TraesCS4A01G066800.1 | Wheat | cytosol, plasma membrane, vacuole | 19.66 | 18.99 |
| TraesCS6A01G418800.1 | Wheat | plastid | 18.73 | 17.89 |
| TraesCS4A01G180600.2 | Wheat | plastid | 18.35 | 17.82 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G066900.3 | EnsemblPlantsGene:TraesCS6A01G066900 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:MATE_fam | PANTHER:PTHR42893 | PANTHER:PTHR42893:SF9 | PFAM:PF01554 | SEG:seg | TMHMM:TMhelix |
| MapMan:11.8.4.1 | MapMan:24.2.4.1.2 | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:35630140..35637005
Molecular Weight (calculated)
57014.8 Da
IEP (calculated)
9.146
GRAVY (calculated)
0.653
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAHLRLLAA GAALPLPAPA SLRRARLLPP APPLPSARLL APHRRGLSPH AAVRVVRCAA AAGAADGGGR EVGVGVEAIA AEGAGIWAQV RDVVVFAGPA
101: LGLWICGPLM SLIDTMVIGQ TSSLQLAALG PGTVFCDYLC YIFMFLSVAT SNMVATSLAN KDEELAQHQV STLLFIALTF GIGMFLFTKI FGVQVLTAFT
201: GSKNHEIISA ANTYAQIRGF AWPAVLVGLV AQSASLGMKD AWGPLKALAA ASVINGVGDI FLCSVCGYGI AGAAWATMVS QIVAAFMMMQ NLNSRGFRAF
301: SFTIPSTREL LQIFEIAAPV FVTMTSKVAF YALLTYSATS MGAITLAGHQ VMVNILCMCT VWGEPLSQTA QSFMPEMIYG ANRNLMKARM LLKSLVMIGA
401: IAGLTVGTVG TIVPWLFPSL FTNDLLVVQQ MHKVLIPYFT ALLVTPSVHS LEGTLLAGRD LRYLSQSMGA CFSIGTFLLL LVRDKCSSLT LCWWVLVFFQ
501: WSRFGSALQR LVSPTGMLYN ENFNQPEHVK VKAT
101: LGLWICGPLM SLIDTMVIGQ TSSLQLAALG PGTVFCDYLC YIFMFLSVAT SNMVATSLAN KDEELAQHQV STLLFIALTF GIGMFLFTKI FGVQVLTAFT
201: GSKNHEIISA ANTYAQIRGF AWPAVLVGLV AQSASLGMKD AWGPLKALAA ASVINGVGDI FLCSVCGYGI AGAAWATMVS QIVAAFMMMQ NLNSRGFRAF
301: SFTIPSTREL LQIFEIAAPV FVTMTSKVAF YALLTYSATS MGAITLAGHQ VMVNILCMCT VWGEPLSQTA QSFMPEMIYG ANRNLMKARM LLKSLVMIGA
401: IAGLTVGTVG TIVPWLFPSL FTNDLLVVQQ MHKVLIPYFT ALLVTPSVHS LEGTLLAGRD LRYLSQSMGA CFSIGTFLLL LVRDKCSSLT LCWWVLVFFQ
501: WSRFGSALQR LVSPTGMLYN ENFNQPEHVK VKAT
001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTAFTGVKN ADIVPAANKY VQIRGLAWPA VLIGWVAQSA SLGMKDSWGP LKALAVASAI NGVGDVVLCT FLGYGIAGAA
301: WATMVSQVVA AYMMMDALNK KGYSAFSFCV PSPSELLTIF GLAAPVFITM MSKVLFYTLL VYFATSMGTN IIAAHQVMLQ IYTMSTVWGE PLSQTAQSFM
401: PELLFGINRN LPKARVLLKS LVIIGATLGI VVGTIGTAVP WLFPGIFTRD KVVTSEMHKV IIPYFLALSI TPSTHSLEGT LLAGRDLRYI SLSMTGCLAV
501: AGLLLMLLSN GGFGLRGCWY ALVGFQWARF SLSLFRLLSR DGVLYSEDTS RYAEKVKAA
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTAFTGVKN ADIVPAANKY VQIRGLAWPA VLIGWVAQSA SLGMKDSWGP LKALAVASAI NGVGDVVLCT FLGYGIAGAA
301: WATMVSQVVA AYMMMDALNK KGYSAFSFCV PSPSELLTIF GLAAPVFITM MSKVLFYTLL VYFATSMGTN IIAAHQVMLQ IYTMSTVWGE PLSQTAQSFM
401: PELLFGINRN LPKARVLLKS LVIIGATLGI VVGTIGTAVP WLFPGIFTRD KVVTSEMHKV IIPYFLALSI TPSTHSLEGT LLAGRDLRYI SLSMTGCLAV
501: AGLLLMLLSN GGFGLRGCWY ALVGFQWARF SLSLFRLLSR DGVLYSEDTS RYAEKVKAA
Arabidopsis Description
DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.