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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY65815 Canola plasma membrane 80.97 98.41
Bra000583.1-P Field mustard plastid 88.43 92.04
CDX82020 Canola plastid 85.82 82.88
AT2G21340.1 Thale cress plastid 85.63 82.11
GSMUA_Achr1P16310_001 Banana plasma membrane 53.92 68.16
VIT_03s0038g00410.t01 Wine grape cytosol, peroxisome, plasma membrane 64.18 67.58
OQU84246 Sorghum plasma membrane 50.37 63.68
VIT_03s0038g00430.t01 Wine grape plastid 63.99 60.49
Solyc01g110280.2.1 Tomato plastid 61.01 58.71
PGSC0003DMT400008778 Potato plastid 59.33 58.46
HORVU6Hr1G012070.9 Barley peroxisome, plastid 55.04 58.42
CDY41956 Canola mitochondrion 58.4 58.4
PGSC0003DMT400008058 Potato plastid 60.63 58.35
CDY42600 Canola mitochondrion 58.21 58.21
PGSC0003DMT400008050 Potato mitochondrion, plasma membrane, plastid, vacuole 51.49 57.74
Os02t0122200-00 Rice plastid, vacuole 50.56 56.81
TraesCS6B01G090100.1 Wheat plasma membrane 53.54 55.95
TraesCS6A01G066900.3 Wheat plasma membrane, plastid, vacuole 55.6 55.81
TraesCSU01G117300.1 Wheat plastid 55.04 55.24
Zm00001d015060_P001 Maize plastid 55.04 54.13
KRH24389 Soybean extracellular 10.82 48.74
CDX74015 Canola plasma membrane 21.64 22.66
CDX74014 Canola plasma membrane 21.83 22.12
CDY07957 Canola plasma membrane 21.83 22.12
CDY07959 Canola plasma membrane 21.83 22.03
CDY22150 Canola cytosol, plasma membrane, vacuole 21.27 21.59
CDY65471 Canola plasma membrane 20.9 21.54
CDY03629 Canola plasma membrane 20.9 21.54
CDY28001 Canola plasma membrane 21.08 21.32
CDY29628 Canola plasma membrane 20.52 21.32
CDY35980 Canola plasma membrane 21.27 21.27
CDY01220 Canola plasma membrane 20.34 21.08
CDY66973 Canola plasma membrane 20.34 21.08
CDY07737 Canola plastid 19.78 19.89
CDY63154 Canola plastid 18.28 19.18
CDX74016 Canola extracellular, plasma membrane, vacuole 4.85 18.84
CDY27977 Canola endoplasmic reticulum, extracellular, plasma membrane 6.53 17.07
CDY27978 Canola plasma membrane 14.37 16.81
CDY12082 Canola plastid 19.96 13.61
CDX90273 Canola plastid 19.96 13.6
Protein Annotations
MapMan:11.8.4.1MapMan:24.2.4.1.2GO:A0A078D267EnsemblPlants:CDX83192ProteinID:CDX83192ProteinID:CDX83192.1
ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855
GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00138730001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR42893PANTHER:PTHR42893:SF9TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0004EE7E5CSEG:seg::::
Description
BnaA03g23140D
Coordinates
chrLK031832:+:334564..337800
Molecular Weight (calculated)
57501.9 Da
IEP (calculated)
7.832
GRAVY (calculated)
0.563
Length
536 amino acids
Sequence
(BLAST)
001: MQSQCKTLAF TFSPISSNHK LPFPSPINLR ACKPPFPSFR SSARFIRNCS SPSGSISRDT EEVTELVQEA AEVEVEEVKK IDDLADQSIW GQMKEIVMFT
101: GPAAGLWICG PLMSLIDTAV IGQGSSVELA ALGPATVVCD YLSYTFMFLS VATSNLVATS LARGDKDEVQ HQISILLFIG LACGVVMMAL TRLFGSGVLT
201: AFTGAKNAEI VPAANTYVQI RGLAWPAVLI GWVAQSASLG MKDSWGPLKA LAVASAINGA GDLVLCTFLG YGIAGAAWAT MVSQVVAAYM MMDALNKKGY
301: NAFSLCVPSP SELFTIIGLA APVFMTMMSK VLFYSLLVYF ATSMGTSVIA AHQVMLQTYN ICTILGEPLS QTAQSFMPEL LFGINRNLPK ARMLLKSLVI
401: IGATLGIVVG TIGTAIPWMF PTIFTQDKVV TFEMHKVIIP YFLALSITPS TLSLEGTLLA GRDLRYISLS TAGCLAVAGL LLMLLSNGGF GLRGCWFALV
501: GFQWARFSLA LVRLLSREGV LYSEDTSRYA EKVKAT
Best Arabidopsis Sequence Match ( AT2G21340.1 )
(BLAST)
001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTAFTGVKN ADIVPAANKY VQIRGLAWPA VLIGWVAQSA SLGMKDSWGP LKALAVASAI NGVGDVVLCT FLGYGIAGAA
301: WATMVSQVVA AYMMMDALNK KGYSAFSFCV PSPSELLTIF GLAAPVFITM MSKVLFYTLL VYFATSMGTN IIAAHQVMLQ IYTMSTVWGE PLSQTAQSFM
401: PELLFGINRN LPKARVLLKS LVIIGATLGI VVGTIGTAVP WLFPGIFTRD KVVTSEMHKV IIPYFLALSI TPSTHSLEGT LLAGRDLRYI SLSMTGCLAV
501: AGLLLMLLSN GGFGLRGCWY ALVGFQWARF SLSLFRLLSR DGVLYSEDTS RYAEKVKAA
Arabidopsis Description
DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.