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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY01220 Canola plasma membrane 96.9 96.71
Bra030446.1-P Field mustard plasma membrane 96.51 96.33
CDY66973 Canola plasma membrane 96.51 96.33
CDY03629 Canola plasma membrane 96.9 96.15
CDY65471 Canola plasma membrane 95.35 94.62
AT1G51340.2 Thale cress plasma membrane 90.7 90.87
Os01t0162101-00 Rice endoplasmic reticulum, extracellular 5.62 76.32
Solyc11g065820.1.1 Tomato cytosol, plasma membrane, vacuole 69.77 70.59
PGSC0003DMT400018991 Potato cytosol, plasma membrane, vacuole 69.96 70.51
VIT_06s0004g02140.t01 Wine grape cytosol, plasma membrane, vacuole 69.38 69.79
PGSC0003DMT400027815 Potato cytosol, plasma membrane, vacuole 67.05 66.28
KRH29719 Soybean extracellular 15.89 65.6
KRH10205 Soybean plasma membrane 69.77 64.98
KRH23130 Soybean plasma membrane 69.38 64.5
GSMUA_Achr3P29780_001 Banana plasma membrane 64.73 64.48
Solyc01g008420.2.1 Tomato plasma membrane 66.86 64.37
GSMUA_Achr4P06960_001 Banana plasma membrane 62.6 64.34
KRH25702 Soybean cytosol, peroxisome, plasma membrane, plastid 25.39 62.98
TraesCS1A01G305200.1 Wheat plasma membrane 60.47 62.78
TraesCS1D01G304800.1 Wheat plasma membrane 60.27 62.58
EES14441 Sorghum plasma membrane 63.57 62.48
TraesCS1B01G315900.1 Wheat plasma membrane 59.88 62.17
HORVU1Hr1G068960.15 Barley plasma membrane 59.69 59.81
VIT_13s0019g05200.t01 Wine grape cytosol 9.69 58.14
CDX74016 Canola extracellular, plasma membrane, vacuole 14.73 55.07
CDX74015 Canola plasma membrane 54.46 54.88
CDY07959 Canola plasma membrane 56.4 54.8
CDX74014 Canola plasma membrane 56.01 54.63
CDY07957 Canola plasma membrane 55.81 54.44
CDY22150 Canola cytosol, plasma membrane, vacuole 55.62 54.36
CDY28001 Canola plasma membrane 54.84 53.4
CDY35980 Canola plasma membrane 54.65 52.61
CDY27977 Canola endoplasmic reticulum, extracellular, plasma membrane 20.16 50.73
Zm00001d035115_P004 Maize plasma membrane 59.3 49.76
KRG96963 Soybean plasma membrane 23.84 45.05
Zm00001d025649_P001 Maize plasma membrane 15.5 42.55
CDY07737 Canola plastid 42.44 41.09
CDY63154 Canola plastid 39.92 40.31
Zm00001d042411_P001 Maize plastid 20.16 40.15
Zm00001d007814_P001 Maize mitochondrion 21.9 39.37
CDY27978 Canola plasma membrane 30.04 33.84
CDY65815 Canola plasma membrane 20.74 24.26
CDY12082 Canola plastid 35.08 23.03
CDX90273 Canola plastid 35.08 23.0
CDX83192 Canola plastid 21.32 20.52
CDX82020 Canola plastid 20.74 19.28
CDY42600 Canola mitochondrion 18.8 18.1
CDY41956 Canola mitochondrion 18.6 17.91
Protein Annotations
MapMan:24.2.4.1.1MapMan:24.2.4.1.3MapMan:25.4.6.1GO:A0A078GYH0UniProt:A0A078GYH0EnsemblPlants:CDY29628
ProteinID:CDY29628ProteinID:CDY29628.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00043379001InterPro:MATE_famPFAM:PF01554PANTHER:PTHR42893PANTHER:PTHR42893:SF2
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EDE282SEG:seg::
Description
BnaA05g15420DProtein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A078GYH0]
Coordinates
chrLK032240:+:508046..510801
Molecular Weight (calculated)
55408.3 Da
IEP (calculated)
8.319
GRAVY (calculated)
0.620
Length
516 amino acids
Sequence
(BLAST)
001: MMSEDFGYNK ETPCDFPRNP LCIFLSDFKS VLKFDELGLE ITRIALPAAL ALTADPIASL VDTAFIGQIG PVELAAVGVS IALFNQVSRI AIFPLVSITT
101: SFVAEEDACS SQENTVQDHK ECIETGINNT KEETQELIPE INKDESKISS SIFSVNKSSV KKRNIPSASS ALIIGAILGL LQAVFLISSA KPLLSFMGVK
201: HDSPMLGPAQ RYLSLRSLGA PAVLLSLATQ GVFRGFKDTT TPLYATVIGD VTNIILDPIF IFVFRLGVTG AATAHVISQY LMCGILLWKL MGQVDIFKMS
301: TKHLQFCRFM KNGFLLLMRV VAVTFCVTLS ASLAAREGPT SMAAFQVCLQ VWLATSLLAD GFAVAGQAIL ASAFAKKDYK RAAATASRVL QLGLVLGFLL
401: AVILGTGLHF GARLFTKDDK VLHLISIGLP FVAGTQPINA LAFVFDGVNF GASDFGYAAA SLVMVAIVSV LCLVLLSATH GFIGLWFGLT IYMSLRAAVG
501: FWRIGTATGP WSFLRR
Best Arabidopsis Sequence Match ( AT1G51340.2 )
(BLAST)
001: MMSEDGYNTD FPRNPLYIFF SDFRSVLKFD ELGLEIARIA LPAALALTAD PIASLVDTAF IGQIGPVELA AVGVSIALFN QVSRIAIFPL VSITTSFVAE
101: EDACSSQQDT VRDHKECIEI GINNPTEETI ELIPEKHKDS LSDEFKTSSS IFSISKPPAK KRNIPSASSA LIIGGVLGLF QAVFLISAAK PLLSFMGVKH
201: DSPMMRPSQR YLSLRSLGAP AVLLSLAAQG VFRGFKDTTT PLFATVIGDV TNIILDPIFI FVFRLGVTGA ATAHVISQYL MCGILLWKLM GQVDIFNMST
301: KHLQFCRFMK NGFLLLMRVI AVTFCVTLSA SLAAREGSTS MAAFQVCLQV WLATSLLADG YAVAGQAILA SAFAKKDYKR AAATASRVLQ LGLVLGFVLA
401: VILGAGLHFG ARVFTKDDKV LHLISIGLPF VAGTQPINAL AFVFDGVNFG ASDFGYAAAS LVMVAIVSIL CLLFLSSTHG FIGLWFGLTI YMSLRAAVGF
501: WRIGTGTGPW SFLRS
Arabidopsis Description
DTX42Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W9H8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.