Factsheet for GSMUA_Achr3P29780_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
plasma membrane 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P06960_001	Banana	plasma membrane	79.73	82.27
KRH71966	Soybean	extracellular, golgi	29.15	72.6
VIT_08s0007g08200.t01	Wine grape	plasma membrane	69.88	71.4
VIT_06s0004g02140.t01	Wine grape	cytosol, plasma membrane, vacuole	68.73	69.4
Solyc11g065820.1.1	Tomato	cytosol, plasma membrane, vacuole	67.18	68.24
PGSC0003DMT400018991	Potato	cytosol, plasma membrane, vacuole	67.37	68.16
TraesCS1D01G304800.1	Wheat	plasma membrane	65.25	68.01
EES14441	Sorghum	plasma membrane	68.73	67.81
TraesCS1A01G305200.1	Wheat	plasma membrane	65.06	67.81
TraesCS1B01G315900.1	Wheat	plasma membrane	64.86	67.61
PGSC0003DMT400027815	Potato	cytosol, plasma membrane, vacuole	66.6	66.09
HORVU1Hr1G068960.15	Barley	plasma membrane	65.44	65.83
Bra014272.1-P	Field mustard	plasma membrane	65.44	65.32
AT1G51340.2	Thale cress	plasma membrane	64.86	65.24
CDY03629	Canola	plasma membrane	65.44	65.19
CDY65471	Canola	plasma membrane	65.44	65.19
Bra030446.1-P	Field mustard	plasma membrane	65.06	65.18
CDY66973	Canola	plasma membrane	65.06	65.18
Os10t0206800-01	Rice	plasma membrane	67.57	65.18
CDY01220	Canola	plasma membrane	64.86	64.99
CDY29628	Canola	plasma membrane	64.48	64.73
Solyc01g008420.2.1	Tomato	plasma membrane	66.8	64.55
KRH33105	Soybean	plasma membrane	61.97	64.07
KRH27482	Soybean	plasma membrane	39.19	63.64
VIT_13s0064g00940.t01	Wine grape	plasma membrane	66.8	63.25
GSMUA_Achr8P31410_001	Banana	cytosol, peroxisome, plasma membrane	59.85	62.88
KRH29719	Soybean	extracellular	15.06	62.4
KRH25702	Soybean	cytosol, peroxisome, plasma membrane, plastid	24.9	62.02
VIT_13s0064g00930.t01	Wine grape	plasma membrane	63.9	61.75
KRH10205	Soybean	plasma membrane	66.02	61.73
KRH23130	Soybean	plasma membrane	66.02	61.62
KRH71965	Soybean	plasma membrane	33.78	60.14
Solyc01g087150.2.1	Tomato	plasma membrane	60.04	59.24
PGSC0003DMT400017707	Potato	cytosol, plasma membrane, vacuole	61.2	59.03
PGSC0003DMT400017700	Potato	plasma membrane	60.04	57.91
VIT_13s0019g05200.t01	Wine grape	cytosol	9.46	56.98
CDX74015	Canola	plasma membrane	55.6	56.25
Bra001282.1-P	Field mustard	plasma membrane	55.6	56.25
CDY07957	Canola	plasma membrane	57.14	55.95
CDX74014	Canola	plasma membrane	57.14	55.95
CDY07959	Canola	plasma membrane	57.34	55.93
Bra001283.1-P	Field mustard	plasma membrane	56.95	55.77
KRH27481	Soybean	plasma membrane	55.98	55.45
AT3G08040.1	Thale cress	cytosol, plasma membrane, vacuole	56.18	55.32
KRH13953	Soybean	plasma membrane	58.69	54.97
KRH37984	Soybean	cytosol, plasma membrane, vacuole	58.49	54.5
CDY22150	Canola	cytosol, plasma membrane, vacuole	55.41	54.36
Bra040047.1-P	Field mustard	cytosol, plasma membrane, vacuole	55.41	54.36
CDX74016	Canola	extracellular, plasma membrane, vacuole	14.48	54.35
Zm00001d035115_P004	Maize	plasma membrane	64.48	54.31
CDY28001	Canola	plasma membrane	55.41	54.15
CDY35980	Canola	plasma membrane	55.02	53.17
Bra029694.1-P	Field mustard	plasma membrane	55.02	53.17
CDY27977	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.66	52.2
KRH20827	Soybean	cytosol, plasma membrane, vacuole	41.31	50.0
KRG96963	Soybean	plasma membrane	23.55	44.69
Zm00001d025649_P001	Maize	plasma membrane	16.02	44.15
GSMUA_AchrUn_...	Banana	plasma membrane	18.34	42.99
Zm00001d042411_P001	Maize	plastid	21.43	42.86
GSMUA_Achr11P...	Banana	plastid	42.08	42.08
Zm00001d007814_P001	Maize	mitochondrion	22.01	39.72
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	20.46	38.83
CDY27978	Canola	plasma membrane	29.73	33.62
GSMUA_Achr1P16310_001	Banana	plasma membrane	19.69	24.06

Protein Annotations

MapMan:24.2.4.1.1	MapMan:24.2.4.1.3	MapMan:25.4.6.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr3G29780_001	EnsemblPlants:GSMUA_Achr3P29780_001	EnsemblPlants:GSMUA_Achr3T29780_001	UniProt:M0SIZ4
InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF2	TIGRFAMs:TIGR00797	TMHMM:TMhelix
UniParc:UPI0002967FA9	SEG:seg	:	:	:	:

Description

MATE efflux protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G29780_001]

Coordinates

chr3:+:28791694..28798345

Molecular Weight (calculated)

55778.6 Da

IEP (calculated)

7.386

GRAVY (calculated)

0.626

Length

518 amino acids

Sequence
(BLAST)

001: MSSLNYRLLD SAATSLMSSP LRIFFRDVRH AFKLDELGLE IMGIAFPAAL ALLADPIASL IDTAFIGHIG PVELAAVGVS IAVFNQVSRI AIFPLVSVTT
101: SFVAEEDAVS KSRSGDPESG EYRRSFSEDS EMKELITHND HDEHAHTSSA SLDKSTTMTE CGHHKRIPSA SSALAIGGIL GFLQTLFLVF GAKPILNYMG
201: IKHDSPMMTP ACQYLTLRSL GAPAVLLSLA MQGVFRGLKD TKTPLYATVV GDATNIILDP IFIFVFQLGV SGAAIAHVIS QYLIALILLW RLLRQVDILP
301: PSIKDLQFGR FLKNGLLLLA RVIAVTFCVT LAASMAARQG SIPMAAFQIC LQIWLATSLL ADGLAVAGQA ILASAFARRD HARATSAASR VLQWGMVLGL
401: VLCIILGTSL QFVSRLFTED NEVLQLIHIG IPFVALTQPI NSLAFVFDGI NYGASDFAYS AYSMVLVALV SIGCLVVLSS SHGFIGIWIA LSIYMSLRMF
501: AGFWRIGTAK GPWSFLGS

Best Arabidopsis Sequence Match ( AT1G51340.2 )
(BLAST)

001: MMSEDGYNTD FPRNPLYIFF SDFRSVLKFD ELGLEIARIA LPAALALTAD PIASLVDTAF IGQIGPVELA AVGVSIALFN QVSRIAIFPL VSITTSFVAE
101: EDACSSQQDT VRDHKECIEI GINNPTEETI ELIPEKHKDS LSDEFKTSSS IFSISKPPAK KRNIPSASSA LIIGGVLGLF QAVFLISAAK PLLSFMGVKH
201: DSPMMRPSQR YLSLRSLGAP AVLLSLAAQG VFRGFKDTTT PLFATVIGDV TNIILDPIFI FVFRLGVTGA ATAHVISQYL MCGILLWKLM GQVDIFNMST
301: KHLQFCRFMK NGFLLLMRVI AVTFCVTLSA SLAAREGSTS MAAFQVCLQV WLATSLLADG YAVAGQAILA SAFAKKDYKR AAATASRVLQ LGLVLGFVLA
401: VILGAGLHFG ARVFTKDDKV LHLISIGLPF VAGTQPINAL AFVFDGVNFG ASDFGYAAAS LVMVAIVSIL CLLFLSSTHG FIGLWFGLTI YMSLRAAVGF
501: WRIGTGTGPW SFLRS

Arabidopsis Description

DTX42Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W9H8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.