Factsheet for Bra014272.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
vacuole 2
plasma membrane 5
extracellular 1
golgi 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65471	Canola	plasma membrane	99.42	99.23
CDY03629	Canola	plasma membrane	98.27	98.08
Bra030446.1-P	Field mustard	plasma membrane	93.64	94.0
AT1G51340.2	Thale cress	plasma membrane	90.75	91.46
Os01t0162101-00	Rice	endoplasmic reticulum, extracellular	5.59	76.32
Solyc11g065820.1.1	Tomato	cytosol, plasma membrane, vacuole	69.94	71.18
PGSC0003DMT400018991	Potato	cytosol, plasma membrane, vacuole	69.56	70.51
VIT_06s0004g02140.t01	Wine grape	cytosol, plasma membrane, vacuole	68.98	69.79
KRH29719	Soybean	extracellular	15.99	66.4
PGSC0003DMT400027815	Potato	cytosol, plasma membrane, vacuole	66.47	66.09
GSMUA_Achr3P29780_001	Banana	plasma membrane	65.32	65.44
GSMUA_Achr4P06960_001	Banana	plasma membrane	63.2	65.34
KRH10205	Soybean	plasma membrane	69.17	64.8
Solyc01g008420.2.1	Tomato	plasma membrane	66.47	64.37
KRH23130	Soybean	plasma membrane	68.59	64.14
TraesCS1D01G304800.1	Wheat	plasma membrane	60.12	62.78
TraesCS1A01G305200.1	Wheat	plasma membrane	59.92	62.58
KRH25702	Soybean	cytosol, peroxisome, plasma membrane, plastid	25.05	62.5
EES14441	Sorghum	plasma membrane	63.2	62.48
TraesCS1B01G315900.1	Wheat	plasma membrane	59.73	62.37
HORVU1Hr1G068960.15	Barley	plasma membrane	59.73	60.19
VIT_13s0019g05200.t01	Wine grape	cytosol	9.44	56.98
Bra001282.1-P	Field mustard	plasma membrane	53.56	54.3
Bra001283.1-P	Field mustard	plasma membrane	55.11	54.06
Bra040047.1-P	Field mustard	cytosol, plasma membrane, vacuole	54.14	53.22
Bra029694.1-P	Field mustard	plasma membrane	53.95	52.24
Zm00001d035115_P004	Maize	plasma membrane	59.34	50.08
KRG96963	Soybean	plasma membrane	23.7	45.05
Zm00001d025649_P001	Maize	plasma membrane	15.41	42.55
Zm00001d042411_P001	Maize	plastid	20.23	40.54
Zm00001d007814_P001	Maize	mitochondrion	21.97	39.72
Bra000055.1-P	Field mustard	plastid	38.92	39.61
Bra010745.1-P	Field mustard	plastid	33.72	32.59
Bra031182.1-P	Field mustard	plastid	20.81	19.57
Bra000583.1-P	Field mustard	plastid	19.27	19.42
Bra011880.1-P	Field mustard	mitochondrion	18.3	17.66

Protein Annotations

MapMan:24.2.4.1.3	MapMan:25.4.6.1	EnsemblPlantsGene:Bra014272	EnsemblPlants:Bra014272.1	EnsemblPlants:Bra014272.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238
GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M4DCQ5	InterPro:MATE_fam
PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF2	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0002545FA2
SEG:seg	:	:	:	:	:

Description

AT1G51340 (E=1e-212) | MATE efflux family protein

Coordinates

chrA08:+:2061776..2064434

Molecular Weight (calculated)

55576.3 Da

IEP (calculated)

8.002

GRAVY (calculated)

0.618

Length

519 amino acids

Sequence
(BLAST)

001: MSEDVGFNKE TPCDYPRNPL CIFLSDFRSV LKFDELGLEI ARIALPAALA LTADPIASLV DTAFIGQIGP VELAAVGVSI ALFNQVSRIA IFPLVSITTS
101: FVAEEDACSS QENTVQDHKE CIETGINNTK EETQELIPEI NKDSLPDESK ISSSIFSVSK SPVKKRNIPS ASSALIIGAI LGLLQAAFLI STARPLLSFM
201: GVKHDSPMLG PAQRYLSLRS LGAPAVLLSL ATQGVFRGFK DTTTPLYATV IGDATNIILD PIFIFVFRLG VTGAATAHVL SQYLMCGILL WKLMGQVDIF
301: NLSTKHLQFS RFMKNGFLLL MRVIAVTFCV TLSASLAARE GSISMAAFQV CLQVWLATSL LADGFAVAGQ AILASAFAKK DYKRAAATAS RVLQLGLVLG
401: FLLAVILGAG LHFGARLFTK DDKVLHLISI GLPFVAGTQP INALAFVFDG VNFGASDFGY AAASLVMVAI VSILCLVLLS STHGFIGLWF GLTIYMSLRA
501: AVGFWRIGTA TGPWSFLRR

Best Arabidopsis Sequence Match ( AT1G51340.2 )
(BLAST)

001: MMSEDGYNTD FPRNPLYIFF SDFRSVLKFD ELGLEIARIA LPAALALTAD PIASLVDTAF IGQIGPVELA AVGVSIALFN QVSRIAIFPL VSITTSFVAE
101: EDACSSQQDT VRDHKECIEI GINNPTEETI ELIPEKHKDS LSDEFKTSSS IFSISKPPAK KRNIPSASSA LIIGGVLGLF QAVFLISAAK PLLSFMGVKH
201: DSPMMRPSQR YLSLRSLGAP AVLLSLAAQG VFRGFKDTTT PLFATVIGDV TNIILDPIFI FVFRLGVTGA ATAHVISQYL MCGILLWKLM GQVDIFNMST
301: KHLQFCRFMK NGFLLLMRVI AVTFCVTLSA SLAAREGSTS MAAFQVCLQV WLATSLLADG YAVAGQAILA SAFAKKDYKR AAATASRVLQ LGLVLGFVLA
401: VILGAGLHFG ARVFTKDDKV LHLISIGLPF VAGTQPINAL AFVFDGVNFG ASDFGYAAAS LVMVAIVSIL CLLFLSSTHG FIGLWFGLTI YMSLRAAVGF
501: WRIGTGTGPW SFLRS

Arabidopsis Description

DTX42Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W9H8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.