Factsheet for VIT_06s0004g02140.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g065820.1.1	Tomato	cytosol, plasma membrane, vacuole	73.49	73.92
PGSC0003DMT400018991	Potato	cytosol, plasma membrane, vacuole	73.68	73.83
VIT_08s0007g08200.t01	Wine grape	plasma membrane	72.51	73.37
VIT_13s0019g05200.t01	Wine grape	cytosol	12.09	72.09
AT1G51340.2	Thale cress	plasma membrane	70.37	70.1
CDY66973	Canola	plasma membrane	70.37	69.83
CDY01220	Canola	plasma membrane	70.37	69.83
Bra030446.1-P	Field mustard	plasma membrane	70.37	69.83
GSMUA_Achr4P06960_001	Banana	plasma membrane	68.23	69.72
CDY29628	Canola	plasma membrane	69.79	69.38
KRH25702	Soybean	cytosol, peroxisome, plasma membrane, plastid	28.07	69.23
Bra014272.1-P	Field mustard	plasma membrane	69.79	68.98
CDY65471	Canola	plasma membrane	69.79	68.85
GSMUA_Achr3P29780_001	Banana	plasma membrane	69.4	68.73
KRH10205	Soybean	plasma membrane	73.88	68.41
CDY03629	Canola	plasma membrane	69.2	68.27
PGSC0003DMT400027815	Potato	cytosol, plasma membrane, vacuole	69.4	68.2
KRH23130	Soybean	plasma membrane	73.68	68.11
KRH29719	Soybean	extracellular	16.37	67.2
Solyc01g008420.2.1	Tomato	plasma membrane	69.98	66.98
VIT_13s0064g00930.t01	Wine grape	plasma membrane	68.62	65.67
VIT_13s0064g00940.t01	Wine grape	plasma membrane	69.4	65.08
TraesCS1A01G305200.1	Wheat	plasma membrane	62.18	64.19
TraesCS1D01G304800.1	Wheat	plasma membrane	61.79	63.78
EES14441	Sorghum	plasma membrane	65.11	63.62
TraesCS1B01G315900.1	Wheat	plasma membrane	61.6	63.58
HORVU1Hr1G068960.15	Barley	plasma membrane	62.38	62.14
Zm00001d035115_P004	Maize	plasma membrane	61.6	51.38
KRG96963	Soybean	plasma membrane	26.51	49.82
Zm00001d025649_P001	Maize	plasma membrane	16.18	44.15
VIT_08s0058g00510.t01	Wine grape	plastid	45.03	41.4
Zm00001d042411_P001	Maize	plastid	20.66	40.93
Zm00001d007814_P001	Maize	mitochondrion	22.22	39.72
VIT_03s0038g03200.t01	Wine grape	plastid	40.16	34.11
VIT_03s0038g00410.t01	Wine grape	cytosol, peroxisome, plasma membrane	21.64	21.81
VIT_03s0038g00430.t01	Wine grape	plastid	23.0	20.81

Protein Annotations

EntrezGene:100241685	wikigene:100241685	MapMan:24.2.4.1.1	MapMan:24.2.4.1.3	MapMan:25.4.6.1	ProteinID:CBI16375
ProteinID:CBI16375.3	UniProt:D7SL47	EMBL:FN594951	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EntrezGene:LOC100241685	wikigene:LOC100241685	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR42893	PANTHER:PTHR42893:SF2	TIGR:TC56446	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI00015C7548
ArrayExpress:VIT_06s0004g02140	EnsemblPlantsGene:VIT_06s0004g02140	EnsemblPlants:VIT_06s0004g02140.t01	unigene:Vvi.5723	RefSeq:XP_002285445	RefSeq:XP_002285445.1
RefSeq:XP_010651236.1	RefSeq:XP_010651237.1	RefSeq:XP_010651238.1	RefSeq:XP_010651239.1	RefSeq:XP_010651240.1	RefSeq:XP_010651241.1
RefSeq:XP_019076330.1	SEG:seg	:	:	:	:

Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:D7SL47]

Coordinates

chr6:+:2592262..2596199

Molecular Weight (calculated)

54421.2 Da

IEP (calculated)

7.180

GRAVY (calculated)

0.701

Length

513 amino acids

Sequence
(BLAST)

001: MAEEDGLCQS RDGKGIPLWI FLKDARFAFK MDELGLEIAQ IAFPAALALT ADPIASLVDT AFIGQLGPVE LAAVGVSIAV FNQVSRIAIF PLVSVTTSFV
101: AEEDTIGILD SEPEVSKSVE MGSAVNGETK KLIPKGSGER PYDLEMHGSG HDTPKFESKR HIPSASAALV VGGILGLIQA IFLISGAKPI LNFMGVHSDS
201: PMLAPAQEYL TLRSLGAPAV LLSLAMQGVF RGFKDTKTPL YATVAGDVTN IILDPIFMFV FHMGVGGAAI AHVISQYIIS VILFWKLMQQ VELLPPSTKV
301: LRFGRFLKNG LLLLMRVIAV TFCVTLAASL AARQGPTSMA AFQVCLQVWL ATSLLADGLA VAGQAILASA FAKQDYSKAT AAASRVLQLG LVLGLVLSSI
401: LGTGMQSAAK LFTKDLSVLH LISIGIPFVA VTQPINSLAF VFDGVNFGAS DFAYSAYSMV LVAIVSILCL FILSSSFGFV GIWVALTIYV TLRAFAGFWR
501: IGTGSGPWSF LRS

Best Arabidopsis Sequence Match ( AT1G51340.2 )
(BLAST)

001: MMSEDGYNTD FPRNPLYIFF SDFRSVLKFD ELGLEIARIA LPAALALTAD PIASLVDTAF IGQIGPVELA AVGVSIALFN QVSRIAIFPL VSITTSFVAE
101: EDACSSQQDT VRDHKECIEI GINNPTEETI ELIPEKHKDS LSDEFKTSSS IFSISKPPAK KRNIPSASSA LIIGGVLGLF QAVFLISAAK PLLSFMGVKH
201: DSPMMRPSQR YLSLRSLGAP AVLLSLAAQG VFRGFKDTTT PLFATVIGDV TNIILDPIFI FVFRLGVTGA ATAHVISQYL MCGILLWKLM GQVDIFNMST
301: KHLQFCRFMK NGFLLLMRVI AVTFCVTLSA SLAAREGSTS MAAFQVCLQV WLATSLLADG YAVAGQAILA SAFAKKDYKR AAATASRVLQ LGLVLGFVLA
401: VILGAGLHFG ARVFTKDDKV LHLISIGLPF VAGTQPINAL AFVFDGVNFG ASDFGYAAAS LVMVAIVSIL CLLFLSSTHG FIGLWFGLTI YMSLRAAVGF
501: WRIGTGTGPW SFLRS

Arabidopsis Description

DTX42Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W9H8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.