Factsheet for VIT_13s0064g00940.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_06s0080g00970.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G08040.1	VIT_06s0080g00970.t01	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0064g00930.t01	Wine grape	plasma membrane	78.98	80.6
KRH27482	Soybean	plasma membrane	41.32	70.85
VIT_08s0007g08200.t01	Wine grape	plasma membrane	64.9	70.02
VIT_06s0004g02140.t01	Wine grape	cytosol, plasma membrane, vacuole	65.08	69.4
Solyc01g087150.2.1	Tomato	plasma membrane	65.27	68.0
GSMUA_Achr4P06960_001	Banana	plasma membrane	62.34	67.93
GSMUA_Achr3P29780_001	Banana	plasma membrane	63.25	66.8
PGSC0003DMT400017700	Potato	plasma membrane	65.27	66.48
PGSC0003DMT400017707	Potato	cytosol, plasma membrane, vacuole	65.08	66.29
CDX74016	Canola	extracellular, plasma membrane, vacuole	16.64	65.94
AT3G08040.1	Thale cress	cytosol, plasma membrane, vacuole	61.97	64.45
CDY28001	Canola	plasma membrane	61.79	63.77
Bra029694.1-P	Field mustard	plasma membrane	62.34	63.62
CDY35980	Canola	plasma membrane	62.34	63.62
CDX74014	Canola	plasma membrane	61.24	63.33
CDY22150	Canola	cytosol, plasma membrane, vacuole	61.06	63.26
Bra040047.1-P	Field mustard	cytosol, plasma membrane, vacuole	61.06	63.26
Bra001283.1-P	Field mustard	plasma membrane	61.06	63.14
CDY07959	Canola	plasma membrane	61.24	63.09
CDY07957	Canola	plasma membrane	60.88	62.95
KRH13953	Soybean	plasma membrane	63.62	62.93
TraesCS1D01G304800.1	Wheat	plasma membrane	57.04	62.78
Bra001282.1-P	Field mustard	plasma membrane	58.68	62.7
CDX74015	Canola	plasma membrane	58.68	62.7
KRH37984	Soybean	cytosol, plasma membrane, vacuole	63.62	62.59
TraesCS1A01G305200.1	Wheat	plasma membrane	56.86	62.58
CDY27977	Canola	endoplasmic reticulum, extracellular, plasma membrane	23.4	62.44
TraesCS1B01G315900.1	Wheat	plasma membrane	56.67	62.37
EES14441	Sorghum	plasma membrane	59.41	61.9
HORVU1Hr1G068960.15	Barley	plasma membrane	57.77	61.36
KRH27481	Soybean	plasma membrane	57.4	60.04
KRH20827	Soybean	cytosol, plasma membrane, vacuole	45.34	57.94
VIT_13s0019g05200.t01	Wine grape	cytosol	8.96	56.98
Zm00001d035115_P004	Maize	plasma membrane	56.31	50.08
CDY27978	Canola	plasma membrane	34.0	40.61
VIT_08s0058g00510.t01	Wine grape	plastid	40.22	39.43
Zm00001d025649_P001	Maize	plasma membrane	13.53	39.36
Zm00001d042411_P001	Maize	plastid	18.1	38.22
Zm00001d007814_P001	Maize	mitochondrion	19.38	36.93
VIT_03s0038g03200.t01	Wine grape	plastid	38.39	34.77
VIT_03s0038g00410.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.38	20.83
VIT_03s0038g00430.t01	Wine grape	plastid	21.02	20.28

Protein Annotations

EntrezGene:100267144	wikigene:100267144	MapMan:24.2.4.1.3	MapMan:25.4.6.1	EMBL:AM436001	ProteinID:CAN71654
ProteinID:CAN71654.1	ProteinID:CCB49509	ProteinID:CCB49509.1	UniProt:F6HB59	EMBL:FN595509	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238
GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EntrezGene:LOC100267144	wikigene:LOC100267144
InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF11	TIGRFAMs:TIGR00797	TMHMM:TMhelix
UniParc:UPI000210A6E9	ArrayExpress:VIT_13s0064g00940	EnsemblPlantsGene:VIT_13s0064g00940	EnsemblPlants:VIT_13s0064g00940.t01	RefSeq:XP_002275374	RefSeq:XP_002275374.2
RefSeq:XP_010659342.1	RefSeq:XP_010659343.1	SEG:seg	:	:	:

Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F6HB59]

Coordinates

chr13:-:22800162..22807290

Molecular Weight (calculated)

58915.7 Da

IEP (calculated)

9.520

GRAVY (calculated)

0.490

Length

547 amino acids

Sequence
(BLAST)

001: MADKVSTDLS PSLPQRKWKM PLLVFFKDVR HVFKMDELGS EILRIAFPAA LALAADPVAS LIDTAFIGHI GPVELAAVGV SIAIFNQASR ITVFPLVSIT
101: TSFVAEEDTV GKKGNEAPKG ENSEKASVQN SETKELEDED VILENLEKGS NPNSEMKELI PEDDLKTTTY KPPSVSTVSP NRVKLKKERR HIPSASTALV
201: IGSFLGLFQT IFLIFAAKPL LSFMGVKSGS SMLTPARRYL TLRALGAPAV LLSLAMQGVF RGFKDTKTPL YATVVGDLTN IILDPIFIFV CKLGVSGAAI
301: AHVISQYLIS LILLLRLMKE VDLLPPSLKD LQFRRFLKNG VLLLGRVIAA TFCVTLAASL AARLGSTPMA AFQICLQVWM TSSLLADGLA VAGQAILACA
401: FAENDYAKAT NAATRVLQMG FILGLGLALL VGLGLQFGAK VFSKDVNVLH LISIGVPFVA ATQPINSLAF VFDGVNFGAS DFAYSAYSMI LVAIVSIASL
501: FCLSKSYGYV GIWVALTIYM GLRTFAGFWR MGTGTGPWHF LRNRSLS

Best Arabidopsis Sequence Match ( AT3G08040.1 )
(BLAST)

001: MTETGDDLAT VKKPIPFLVI FKDLRHVFSR DTTGREILGI AFPAALALAA DPIASLIDTA FVGRLGAVQL AAVGVSIAIF NQASRITIFP LVSLTTSFVA
101: EEDTMEKMKE EANKANLVHA ETILVQDSLE KGISSPTSND TNQPQQPPAP DTKSNSGNKS NKKEKRTIRT ASTAMILGLI LGLVQAIFLI FSSKLLLGVM
201: GVKPNSPMLS PAHKYLSIRA LGAPALLLSL AMQGIFRGFK DTKTPLFATV VADVINIVLD PIFIFVLRLG IIGAAIAHVI SQYFMTLILF VFLAKKVNLI
301: PPNFGDLQFG RFLKNGLLLL ARTIAVTFCQ TLAAAMAARL GTTPMAAFQI CLQVWLTSSL LNDGLAVAGQ AILACSFAEK DYNKVTAVAS RVLQMGFVLG
401: LGLSVFVGLG LYFGAGVFSK DPAVIHLMAI GIPFIAATQP INSLAFVLDG VNFGASDFAY TAYSMVGVAA ISIAAVIYMA KTNGFIGIWI ALTIYMALRA
501: ITGIARMATG TGPWRFLRGR SSSSSS

Arabidopsis Description

DTX43Protein DETOXIFICATION 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFB0]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.