Factsheet for Bra011880.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 6
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41956	Canola	mitochondrion	99.44	99.81
AT4G39030.1	Thale cress	mitochondrion	88.66	87.85
VIT_03s0038g00410.t01	Wine grape	cytosol, peroxisome, plasma membrane	58.36	61.69
OQU84246	Sorghum	plasma membrane	47.77	60.61
GSMUA_Achr1P16310_001	Banana	plasma membrane	47.4	60.14
Bra031182.1-P	Field mustard	plastid	58.74	57.25
Bra000583.1-P	Field mustard	plastid	53.35	55.73
VIT_03s0038g00430.t01	Wine grape	plastid	58.55	55.56
Os02t0122200-00	Rice	plastid, vacuole	48.14	54.3
PGSC0003DMT400008058	Potato	plastid	55.58	53.68
HORVU6Hr1G012070.9	Barley	peroxisome, plastid	50.37	53.66
Solyc01g110280.2.1	Tomato	plastid	55.39	53.5
TraesCS6B01G090100.1	Wheat	plasma membrane	49.81	52.24
PGSC0003DMT400008778	Potato	plastid	52.79	52.21
PGSC0003DMT400008050	Potato	mitochondrion, plasma membrane, plastid, vacuole	46.28	52.09
TraesCSU01G117300.1	Wheat	plastid	51.49	51.87
TraesCS6A01G066900.3	Wheat	plasma membrane, plastid, vacuole	51.3	51.69
Zm00001d015060_P001	Maize	plastid	51.49	50.83
KRH24389	Soybean	extracellular	8.55	38.66
Bra001282.1-P	Field mustard	plasma membrane	18.96	19.92
Bra001283.1-P	Field mustard	plasma membrane	19.33	19.66
Bra029694.1-P	Field mustard	plasma membrane	19.52	19.59
Bra040047.1-P	Field mustard	cytosol, plasma membrane, vacuole	18.96	19.32
Bra000055.1-P	Field mustard	plastid	18.22	19.22
Bra030446.1-P	Field mustard	plasma membrane	17.66	18.38
Bra014272.1-P	Field mustard	plasma membrane	17.66	18.3
Bra010745.1-P	Field mustard	plastid	17.66	17.69

Protein Annotations

MapMan:11.8.4.1	MapMan:24.2.4.1.2	EnsemblPlantsGene:Bra011880	EnsemblPlants:Bra011880.1	EnsemblPlants:Bra011880.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006810	GO:GO:0006855	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009536	GO:GO:0009605	GO:GO:0009607	GO:GO:0009624	GO:GO:0009697	GO:GO:0009719
GO:GO:0009751	GO:GO:0009941	GO:GO:0009987	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0031348	GO:GO:0042742	GO:GO:0045087	GO:GO:0055085	UniProt:M4D5X3
InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF9	TIGRFAMs:TIGR00797	TMHMM:TMhelix
UniParc:UPI0002545E7C	SEG:seg	:	:	:	:

Description

AT4G39030 (E=6e-259) EDS5, SID1 | EDS5 (ENHANCED DISEASE SUSCEPTIBILITY 5); antiporter/ multidrug efflux pump/ transporter

Coordinates

chrA01:+:103695..106639

Molecular Weight (calculated)

58374.8 Da

IEP (calculated)

9.810

GRAVY (calculated)

0.440

Length

538 amino acids

Sequence
(BLAST)

001: MLMKTQRLTI SPFLPTKSHQ PLIRCLGGGS VLTRRKLGGI TTAAAPIFQG KPVVTRREIK TGRITRNCVE NDGGTEEEEE EEKKSRGLVK ESVWEQMKEI
101: VKFTGPAMGM WVCGPLMSLI DTVVIGQGSS VELAALGPGT VLCDHMSYVF MFLSVATSNM VATSLAKQDK KEAQHQISVL LFIGLVCGLM MLLLTRLFGP
201: WAVTAFTRGK NIEIVPAANT YVQIRGLAWP FILVGLVAQS ASLGMKNSWG PLKALAAATV INGLGDTILC LFLGQGIAGA AWATTISQVV SAYMMMDSLN
301: KEGYNAYSFA VPTPQELWKI SALAAPVFIS IFSKIAFYSF IIYCATSMGT HVLAAHQVMA QTYRMCNVWG EPLSQTAQSF MPEMLYGANR NLPKARTLLK
401: SLMIIGATLG LVLGIIGTSV PGLFPGVYTH DKVIITEMHR LLIPFFMALS ALPMTVSLEG TLLAGRDLKF VSSVMSSSFV LGCLTLMFVT RSGYGLVGCW
501: MVLVGFQWGR FGLYLRRLLS PGGILNTDVL TTKKIKSV

Best Arabidopsis Sequence Match ( AT4G39030.1 )
(BLAST)

001: MLIKSQRLTL FSPLLSKTRR IPVNSHQTLV AESVITRRTL GAITATPSFH KNPVVIRRRI KLERVTRNCV RIDREIDEEE EEEEKERGDL VKQSIWEQMK
101: EIVKFTGPAM GMWICGPLMS LIDTVVIGQG SSIELAALGP GTVLCDHMSY VFMFLSVATS NMVATSLAKQ DKKEAQHQIS VLLFIGLVCG LMMLLLTRLF
201: GPWAVTAFTR GKNIEIVPAA NKYIQIRGLA WPFILVGLVA QSASLGMKNS WGPLKALAAA TIINGLGDTI LCLFLGQGIA GAAWATTASQ IVSAYMMMDS
301: LNKEGYNAYS FAIPSPQELW KISALAAPVF ISIFSKIAFY SFIIYCATSM GTHVLAAHQV MAQTYRMCNV WGEPLSQTAQ SFMPEMLYGA NRNLPKARTL
401: LKSLMIIGAT LGLVLGVIGT AVPGLFPGVY THDKVIISEM HRLLIPFFMA LSALPMTVSL EGTLLAGRDL KFVSSVMSSS FIIGCLTLMF VTRSGYGLLG
501: CWFVLVGFQW GRFGLYLRRL LSPGGILNSD GPSPYTVEKI KSI

Arabidopsis Description

DTX47Protein DETOXIFICATION 47, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q945F0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.