Factsheet for Zm00001d015060_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84246	Sorghum	plasma membrane	75.23	96.7
Os02t0122200-00	Rice	plastid, vacuole	71.19	81.34
TraesCSU01G117300.1	Wheat	plastid	77.25	78.84
TraesCS6B01G090100.1	Wheat	plasma membrane	73.76	78.36
TraesCS6A01G066900.3	Wheat	plasma membrane, plastid, vacuole	76.7	78.28
HORVU6Hr1G012070.9	Barley	peroxisome, plastid	72.29	78.02
GSMUA_Achr1P16310_001	Banana	plasma membrane	55.78	71.7
CDY65815	Canola	plasma membrane	51.38	63.49
VIT_03s0038g00410.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.05	58.94
CDX83192	Canola	plastid	54.13	55.04
CDX82020	Canola	plastid	55.6	54.59
Bra031182.1-P	Field mustard	plastid	55.23	54.53
KRH29368	Soybean	plastid	54.31	54.21
PGSC0003DMT400008778	Potato	plastid	53.95	54.04
KRH29367	Soybean	plastid	54.31	54.01
PGSC0003DMT400008058	Potato	plastid	54.31	53.14
AT2G21340.1	Thale cress	plastid	54.5	53.13
VIT_03s0038g00430.t01	Wine grape	plastid	54.86	52.73
Solyc01g110280.2.1	Tomato	plastid	53.58	52.42
Bra000583.1-P	Field mustard	plastid	49.17	52.04
CDY42600	Canola	mitochondrion	50.83	51.68
CDY41956	Canola	mitochondrion	50.83	51.68
Bra011880.1-P	Field mustard	mitochondrion	50.83	51.49
AT4G39030.1	Thale cress	mitochondrion	51.19	51.38
PGSC0003DMT400008050	Potato	mitochondrion, plasma membrane, plastid, vacuole	44.95	51.26
KRH24389	Soybean	extracellular	9.54	43.7
Zm00001d028228_P001	Maize	cytosol, plasma membrane, vacuole	21.1	20.8
Zm00001d021446_P002	Maize	plastid	19.27	18.13
Zm00001d040665_P001	Maize	plastid	18.35	17.92
Zm00001d005080_P002	Maize	plastid	17.25	16.79
Zm00001d035115_P004	Maize	plasma membrane	17.61	15.61
Zm00001d042411_P001	Maize	plastid	6.61	13.9
Zm00001d025649_P001	Maize	plasma membrane	4.77	13.83
Zm00001d007814_P001	Maize	mitochondrion	6.97	13.24
Zm00001d035381_P001	Maize	plasma membrane	13.76	10.98

Protein Annotations

EnsemblPlants:Zm00001d015060_P001	EnsemblPlants:Zm00001d015060_T001	EnsemblPlantsGene:Zm00001d015060	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR42893	PANTHER:PTHR42893:SF9	ProteinID:AQK67967.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0008430C47
UniProt:A0A1D6GYY3	MapMan:11.8.4.1	MapMan:24.2.4.1.2	:	:	:

Description

multidrug and toxic compound extrusion6 multidrug and toxic compound extrusion6

Coordinates

chr5:-:73779553..73787141

Molecular Weight (calculated)

58531.3 Da

IEP (calculated)

9.119

GRAVY (calculated)

0.571

Length

545 amino acids

Sequence
(BLAST)

001: MSAHLRLLSA AHVSAPTPTS LHRLRGPPPS PPAARLRLLL RPPRLGGSQA RFAGAVRCSG SASAPAVARV GEDSDAAAGI WEQVRDIVVF AGPALGLWIC
101: GPLMSLIDTM VIGQTSALQL AALGPGTVFC DYLSYIFMFL SVATSNMVAT SLAKKVCPLI LSETHSSSFY HTQDEELTQH QVSMLLFLAL ACGIGMFLFT
201: KVFGTQVLTA FTGSGNYELI SSANTYAQIR GFAWPAVLVG LVAQSASLGM KDSWGPLKAL AAASVINGVG DIFLCSVCDY GIAGAAWATM VSQVVAAFMM
301: MQNLSNKGFR AFSFTIPSVR ELLQIFEIAA PVFVTMTSKV AFYALLTYSA TSMGAITLAA HQVMINVLCM CTVWGEPLSQ TAQSFMPELV YGANRNLTKA
401: RMLLKSLVII GAITGLTLGV VGTLVPWLFP SVFTNDQRVI QQMHRVLAPY FSVLLVTPSI HSLEGTLLAG RDLRYLSQSM GVCFSIGTLL LMLLRSKGSL
501: AGCWWVLVLF QWSRFGSALL RLVSPTGMLF NKNFNQVEYI EAKTT

Best Arabidopsis Sequence Match ( AT2G21340.1 )
(BLAST)

001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTAFTGVKN ADIVPAANKY VQIRGLAWPA VLIGWVAQSA SLGMKDSWGP LKALAVASAI NGVGDVVLCT FLGYGIAGAA
301: WATMVSQVVA AYMMMDALNK KGYSAFSFCV PSPSELLTIF GLAAPVFITM MSKVLFYTLL VYFATSMGTN IIAAHQVMLQ IYTMSTVWGE PLSQTAQSFM
401: PELLFGINRN LPKARVLLKS LVIIGATLGI VVGTIGTAVP WLFPGIFTRD KVVTSEMHKV IIPYFLALSI TPSTHSLEGT LLAGRDLRYI SLSMTGCLAV
501: AGLLLMLLSN GGFGLRGCWY ALVGFQWARF SLSLFRLLSR DGVLYSEDTS RYAEKVKAA

Arabidopsis Description

DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.