CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
vacuole 2
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29368	Soybean	plastid	87.41	87.73
VIT_03s0038g00410.t01	Wine grape	cytosol, peroxisome, plasma membrane	63.5	68.37
GSMUA_Achr1P16310_001	Banana	plasma membrane	52.55	67.92
KRH24389	Soybean	extracellular	14.05	64.71
OQU84246	Sorghum	plasma membrane	49.45	63.92
VIT_03s0038g00430.t01	Wine grape	plastid	65.33	63.14
Os02t0122200-00	Rice	plastid, vacuole	51.64	59.33
HORVU6Hr1G012070.9	Barley	peroxisome, plastid	54.56	59.21
PGSC0003DMT400008058	Potato	plastid	59.12	58.17
Solyc01g110280.2.1	Tomato	plastid	58.76	57.81
PGSC0003DMT400008778	Potato	plastid	56.93	57.35
TraesCS6B01G090100.1	Wheat	plasma membrane	53.65	57.31
PGSC0003DMT400008050	Potato	mitochondrion, plasma membrane, plastid, vacuole	48.91	56.07
TraesCSU01G117300.1	Wheat	plastid	54.56	55.99
TraesCS6A01G066900.3	Wheat	plasma membrane, plastid, vacuole	54.56	55.99
Zm00001d015060_P001	Maize	plastid	54.01	54.31
KRH71966	Soybean	extracellular, golgi	8.94	23.56
KRH29719	Soybean	extracellular	5.29	23.2
KRH25702	Soybean	cytosol, peroxisome, plasma membrane, plastid	8.58	22.6
KRH33105	Soybean	plasma membrane	20.62	22.55
KRH71965	Soybean	plasma membrane	11.68	21.99
KRH74091	Soybean	plasma membrane	20.8	21.67
KRH23130	Soybean	plasma membrane	21.9	21.62
KRH10205	Soybean	plasma membrane	21.72	21.48
KRH27482	Soybean	plasma membrane	12.41	21.32
KRH14024	Soybean	plasma membrane	21.17	20.75
KRH49460	Soybean	plastid	19.89	20.22
KRH13953	Soybean	plasma membrane	19.89	19.71
KRH27481	Soybean	plasma membrane	18.61	19.5
KRH37984	Soybean	cytosol, plasma membrane, vacuole	19.71	19.42
KRH27483	Soybean	cytosol	7.66	19.27
KRH00327	Soybean	plastid	18.43	17.03
KRG96963	Soybean	plasma membrane	8.39	16.85
KRH20827	Soybean	cytosol, plasma membrane, vacuole	13.14	16.82

Protein Annotations

EntrezGene:100778295	MapMan:11.8.4.1	MapMan:24.2.4.1.2	EMBL:ACUP02006798	UniProt:D6BM32	EMBL:FJ528665
EnsemblPlantsGene:GLYMA_11G112100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlants:KRH29367	ProteinID:KRH29367	ProteinID:KRH29367.1	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893
PANTHER:PTHR42893:SF9	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0001D26888	SEG:seg	:

Description

hypothetical protein

Coordinates

chr11:+:8549493..8555269

Molecular Weight (calculated)

59824.1 Da

IEP (calculated)

8.745

GRAVY (calculated)

0.484

Length

548 amino acids

Sequence
(BLAST)

001: MAFKLKSLPL LCSLHSPSRQ NPNSTLSNHH FSRRFFAPSI PPTLCLSGAA SASTFHRHRF FVTARSQDED QITEALEQEE EKDNEEISRQ GEKKELAKQG
101: IWDQIKEIVM FTGPATGLWI CGPLMSLIDT AVIGQRSSIE LAALGPATVV CDYMCYVFMF LSIATSNMVA TALAKQDKEE VQHHISVLLF VGLSCGIAML
201: LFTRLFGAAI ITAFTGPKNV HVVPAASNYV KIRGLASPAL LVGWVAQSAS LGMKDSLGPL KALAAATVIN VAGCVLLCTY LGYGIVGAAW ATMVSQVVAS
301: YMMIQNLNMK GYNALAFSIP SGKELLTIFG LAAPVFITLM SKVAFYALLI YFATSMGTHT MAAHQVMVQT YLMCTVWGEP LSQTSQSFMP ELIYGVNRSL
401: SKARMLLRSL VIIGAILGLL LGIIGTSVPW LFPNIFTPDR MVIQEMHKVL IPYFIALAVT PPTVSLEGTL LAGRDLKFIS LSMSGCFCVG SLVLWALSSR
501: YGLLGCWFSL ALFQWARFSM ALQRLLSPKG ILYSEDTEQY KLLKLRTA

Best Arabidopsis Sequence Match ( AT2G21340.1 )
(BLAST)

001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTAFTGVKN ADIVPAANKY VQIRGLAWPA VLIGWVAQSA SLGMKDSWGP LKALAVASAI NGVGDVVLCT FLGYGIAGAA
301: WATMVSQVVA AYMMMDALNK KGYSAFSFCV PSPSELLTIF GLAAPVFITM MSKVLFYTLL VYFATSMGTN IIAAHQVMLQ IYTMSTVWGE PLSQTAQSFM
401: PELLFGINRN LPKARVLLKS LVIIGATLGI VVGTIGTAVP WLFPGIFTRD KVVTSEMHKV IIPYFLALSI TPSTHSLEGT LLAGRDLRYI SLSMTGCLAV
501: AGLLLMLLSN GGFGLRGCWY ALVGFQWARF SLSLFRLLSR DGVLYSEDTS RYAEKVKAA

Arabidopsis Description

DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.