CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29367	Soybean	plastid	87.73	87.41
GSMUA_Achr1P16310_001	Banana	plasma membrane	52.56	67.69
VIT_03s0038g00410.t01	Wine grape	cytosol, peroxisome, plasma membrane	63.0	67.58
KRH24389	Soybean	extracellular	14.47	66.39
OQU84246	Sorghum	plasma membrane	49.82	64.15
VIT_03s0038g00430.t01	Wine grape	plastid	65.02	62.61
PGSC0003DMT400008058	Potato	plastid	59.71	58.53
HORVU6Hr1G012070.9	Barley	peroxisome, plastid	54.03	58.42
Os02t0122200-00	Rice	plastid, vacuole	50.92	58.28
Solyc01g110280.2.1	Tomato	plastid	59.34	58.17
PGSC0003DMT400008778	Potato	plastid	57.33	57.54
TraesCS6B01G090100.1	Wheat	plasma membrane	53.3	56.73
PGSC0003DMT400008050	Potato	mitochondrion, plasma membrane, plastid, vacuole	49.27	56.28
TraesCSU01G117300.1	Wheat	plastid	54.4	55.62
TraesCS6A01G066900.3	Wheat	plasma membrane, plastid, vacuole	54.4	55.62
Zm00001d015060_P001	Maize	plastid	54.21	54.31
KRH71966	Soybean	extracellular, golgi	8.97	23.56
KRH33105	Soybean	plasma membrane	21.43	23.35
KRH29719	Soybean	extracellular	5.13	22.4
KRH71965	Soybean	plasma membrane	11.9	22.34
KRH27483	Soybean	cytosol	8.61	21.56
KRH27482	Soybean	plasma membrane	12.27	21.0
KRH74091	Soybean	plasma membrane	20.15	20.91
KRH23130	Soybean	plasma membrane	21.25	20.9
KRH10205	Soybean	plasma membrane	21.06	20.76
KRH25702	Soybean	cytosol, peroxisome, plasma membrane, plastid	7.69	20.19
KRH14024	Soybean	plasma membrane	20.33	19.86
KRH13953	Soybean	plasma membrane	19.96	19.71
KRH49460	Soybean	plastid	19.23	19.48
KRH37984	Soybean	cytosol, plasma membrane, vacuole	19.78	19.42
KRH27481	Soybean	plasma membrane	18.13	18.93
KRH20827	Soybean	cytosol, plasma membrane, vacuole	13.92	17.76
KRH00327	Soybean	plastid	18.13	16.69
KRG96963	Soybean	plasma membrane	7.33	14.65

Protein Annotations

EntrezGene:100778835	MapMan:11.8.4.1	MapMan:24.2.4.1.2	EMBL:ACUP02006798	EnsemblPlantsGene:GLYMA_11G112200	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238
GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:I1LJ83	EnsemblPlants:KRH29368
ProteinID:KRH29368	ProteinID:KRH29368.1	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF9
TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI000233CCA9	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr11:+:8558789..8565183

Molecular Weight (calculated)

59516.7 Da

IEP (calculated)

9.275

GRAVY (calculated)

0.483

Length

546 amino acids

Sequence
(BLAST)

001: MALKLSSLSL HSSLRHQHPN SSHSNHRIPL RFFAPSLPPT SCLSGAASVS TFHRTLFAVT VRAFQSQDES KSSDVFEEEE KDEEISRQGE KKELAKQSIW
101: SQIKEIVMFT GPATGLWICG PLMSLIDTAV IGQRSSIELA ALGPATVVCD YMSYVFMFLS IATSNMVATA LAKQDKEEVQ HHISVLLFIG LSCGVGMLLF
201: SRLFGASLIT AFTGPKNAHV VPAASNYVKI RGLAWPALLV GWVAQSASLG MKDSLGPLKA LAAATVINFA GCILLCTYLG YGIVGAAWAT MVAQVVAAYM
301: MIQNLNMKGY NALAFSIPTG KEILMILGLA APVFLTLMSK VAFYALLIYF ATSMGTHTMA AHQVMVQTYG MCTVWGEPLS QTAQSFMPEL IYGVNRSLSK
401: ARLLLKSLVT IGAMLGLLLG IVGTSVPWLF PYVFTPDRMV IQEMHKVLIP YFIALAITPP THSLEGTLLA GRDLKFISLS MTGCFCVGTL VLWALSSRFG
501: LLGCWFSLAL FQWARFSIAL RRLLSPKGIL YSEDTDQYKL RKLRTA

Best Arabidopsis Sequence Match ( AT2G21340.1 )
(BLAST)

001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTAFTGVKN ADIVPAANKY VQIRGLAWPA VLIGWVAQSA SLGMKDSWGP LKALAVASAI NGVGDVVLCT FLGYGIAGAA
301: WATMVSQVVA AYMMMDALNK KGYSAFSFCV PSPSELLTIF GLAAPVFITM MSKVLFYTLL VYFATSMGTN IIAAHQVMLQ IYTMSTVWGE PLSQTAQSFM
401: PELLFGINRN LPKARVLLKS LVIIGATLGI VVGTIGTAVP WLFPGIFTRD KVVTSEMHKV IIPYFLALSI TPSTHSLEGT LLAGRDLRYI SLSMTGCLAV
501: AGLLLMLLSN GGFGLRGCWY ALVGFQWARF SLSLFRLLSR DGVLYSEDTS RYAEKVKAA

Arabidopsis Description

DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.