Subcellular Localization
min:
: max
Winner_takes_all: plastid, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG32859 | Sorghum | plastid | 79.37 | 88.11 |
| Os07t0407900-01 | Rice | cytosol, peroxisome, plasma membrane | 69.84 | 67.18 |
| Zm00001d008235_P001 | Maize | golgi, peroxisome, plasma membrane | 42.06 | 46.7 |
| Zm00001d045826_P001 | Maize | plasma membrane | 31.35 | 43.65 |
| Zm00001d044777_P001 | Maize | plastid | 43.65 | 43.14 |
| Zm00001d047420_P001 | Maize | plasma membrane | 29.76 | 39.89 |
| AT5G27370.1 | Thale cress | plasma membrane | 27.38 | 36.13 |
| Zm00001d011558_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 29.76 | 36.06 |
| Zm00001d007047_P001 | Maize | golgi, plasma membrane, vacuole | 26.59 | 35.26 |
| Zm00001d016492_P001 | Maize | cytosol, plasma membrane, vacuole | 28.57 | 34.12 |
| Zm00001d034995_P001 | Maize | plastid | 30.95 | 33.19 |
| Zm00001d009557_P001 | Maize | cytosol | 30.56 | 32.63 |
| Zm00001d044822_P001 | Maize | plastid | 26.19 | 32.2 |
| Zm00001d046149_P001 | Maize | plastid | 29.37 | 29.13 |
| Zm00001d037387_P001 | Maize | cytosol | 31.75 | 28.47 |
| Zm00001d012217_P001 | Maize | plasma membrane | 27.78 | 27.34 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 47.62 | 27.15 |
Protein Annotations
| EnsemblPlants:Zm00001d044435_P001 | EnsemblPlants:Zm00001d044435_T001 | EnsemblPlantsGene:Zm00001d044435 | EntrezGene:103651591 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF7 | PFAM:PF05078 | ProteinID:ONM41159.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000221AB71 | UniProt:A0A1D6NLS3 | MapMan:35.1 | : |
Description
DUF679 domain membrane protein 7
Coordinates
chr3:+:228026403..228027161
Molecular Weight (calculated)
26884.1 Da
IEP (calculated)
8.311
GRAVY (calculated)
0.162
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVAETSSGG GGEVHISIPP MAATTTPDGI RESSAAPSPL RSRGSTPPRQ LKAAPAPAVA DTPATAIDKT LASVANLAKL LPTGTALAFQ SLSPSFTNRG
101: ACLPSNRYLT AALLYLCLVS CVFFSFTDSF VGTDGKLYYG LATVKGFLVF NYTGDEDDEG DAERRRQVFK DLRRLRIRWV DYVHAGFSAV VFLTVAFGTA
201: AVQSCFFPNA GENVNQMLIN LPLGAGFFST MVFLVFPTTR KGIDYTGHFT NV
101: ACLPSNRYLT AALLYLCLVS CVFFSFTDSF VGTDGKLYYG LATVKGFLVF NYTGDEDDEG DAERRRQVFK DLRRLRIRWV DYVHAGFSAV VFLTVAFGTA
201: AVQSCFFPNA GENVNQMLIN LPLGAGFFST MVFLVFPTTR KGIDYTGHFT NV
001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
Arabidopsis Description
DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.