Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d044435_P001 | Maize | cytosol, plastid, vacuole | 88.11 | 79.37 |
| KXG32858 | Sorghum | plastid | 48.46 | 70.97 |
| Os07t0407900-01 | Rice | cytosol, peroxisome, plasma membrane | 66.96 | 58.02 |
| KXG32269 | Sorghum | cytosol, peroxisome, plasma membrane | 43.17 | 42.42 |
| KXG19680 | Sorghum | plastid | 45.37 | 42.21 |
| OQU76129 | Sorghum | plastid | 40.97 | 40.97 |
| KXG19859 | Sorghum | plasma membrane | 34.36 | 34.36 |
| EER94799 | Sorghum | plasma membrane | 26.87 | 31.61 |
| KXG33079 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 28.19 | 30.77 |
| AT5G27370.1 | Thale cress | plasma membrane | 25.11 | 29.84 |
| EES19945 | Sorghum | cytosol | 31.28 | 29.71 |
| EES05060 | Sorghum | cytosol, plasma membrane, vacuole | 26.87 | 29.33 |
| EES14365 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion, plastid | 32.16 | 29.2 |
| EER89477 | Sorghum | plastid | 24.23 | 25.94 |
| EES01865 | Sorghum | plasma membrane | 25.11 | 25.68 |
| EER97642 | Sorghum | peroxisome | 24.67 | 25.34 |
| EER88463 | Sorghum | plastid | 29.52 | 24.1 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 45.81 | 23.53 |
Protein Annotations
| EnsemblPlants:KXG32859 | EnsemblPlantsGene:SORBI_3003G215200 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DMP |
| PANTHER:PTHR31621 | PANTHER:PTHR31621:SF7 | PFAM:PF05078 | ProteinID:KXG32859 | ProteinID:KXG32859.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00081AD31B | UniProt:A0A1B6Q4K0 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr3:+:54982875..54984092
Molecular Weight (calculated)
24335.0 Da
IEP (calculated)
9.120
GRAVY (calculated)
0.013
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAETSSGG GEVHVPIPPM VATTSDVIRE SSAAPSPFRS RGNTPPRQLK QAAPVAAVAE ADTPATAMDK TLASVANLAK LLPTGTALAF QSLSPSFTNR
101: GACLPSNRDG KLYYGVATVK GFLVFNYTGD DDEGDAERRR QVFKNLRRLR IRWVDYVHAV FSAVVFLTVA FSTVSVQSCF FPDASENVNQ MLTNLPLGAG
201: FFSAMVFLVF PTTRKGIDYT GPFTNNV
101: GACLPSNRDG KLYYGVATVK GFLVFNYTGD DDEGDAERRR QVFKNLRRLR IRWVDYVHAV FSAVVFLTVA FSTVSVQSCF FPDASENVNQ MLTNLPLGAG
201: FFSAMVFLVF PTTRKGIDYT GPFTNNV
001: MSSPSSLTQR NPTSSQEQSE SVPQLRRQTS QHAVMSQTLT SAANLANLLP TGTLLAFTLL IPVFTSNGSC DYPTQVLTIV LLTLLSISCF LSSFTDSVKA
101: EDGNVYYGFA TRKGMWVFDY PDPDGLGLPN LSKYRIRIID WIHAVLSVLV FGAVALRDKN AVSCFYPAPE QETKKVLDIV PMGVGVICGM LFLVFPARRH
201: GIGYPVTGDG GRR
101: EDGNVYYGFA TRKGMWVFDY PDPDGLGLPN LSKYRIRIID WIHAVLSVLV FGAVALRDKN AVSCFYPAPE QETKKVLDIV PMGVGVICGM LFLVFPARRH
201: GIGYPVTGDG GRR
Arabidopsis Description
DMP3Protein DMP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STW3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.