CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008235_P001	Maize	golgi, peroxisome, plasma membrane	81.82	83.26
TraesCS6A01G123100.1	Wheat	plastid	70.56	75.81
HORVU6Hr1G022610.1	Barley	plasma membrane	69.26	75.47
TraesCS6B01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	70.13	75.0
TraesCS6D01G113300.1	Wheat	plastid	69.26	74.42
TraesCS6D01G113400.1	Wheat	plastid	68.4	73.83
TraesCS2D01G159400.1	Wheat	peroxisome	67.53	73.24
Os01t0388700-01	Rice	cytosol, peroxisome, plasma membrane	70.56	72.44
TraesCS2A01G153900.1	Wheat	cytosol, peroxisome, vacuole	66.67	72.3
TraesCS2B01G179200.1	Wheat	cytosol, peroxisome, vacuole	67.1	68.28
HORVU1Hr1G067430.1	Barley	mitochondrion	64.5	65.64
HORVU2Hr1G027720.1	Barley	mitochondrion, plastid	56.71	57.71
KXG19859	Sorghum	plasma membrane	54.98	55.95
GSMUA_AchrUn_...	Banana	plastid	44.59	52.28
KXG32858	Sorghum	plastid	32.47	48.39
OQU76129	Sorghum	plastid	42.86	43.61
KXG19680	Sorghum	plastid	45.89	43.44
KXG32859	Sorghum	plastid	42.42	43.17
EER94799	Sorghum	plasma membrane	32.47	38.86
AT5G27370.1	Thale cress	plasma membrane	30.3	36.65
EES05060	Sorghum	cytosol, plasma membrane, vacuole	32.03	35.58
KXG33079	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	31.6	35.1
EER89477	Sorghum	plastid	30.3	33.02
EES19945	Sorghum	cytosol	32.03	30.96
EES14365	Sorghum	cytosol, endoplasmic reticulum, mitochondrion, plastid	32.47	30.0
EER97642	Sorghum	peroxisome	28.14	29.41
EES01865	Sorghum	plasma membrane	25.97	27.03
EER88463	Sorghum	plastid	29.0	24.1

Protein Annotations

EnsemblPlants:KXG32269	EnsemblPlantsGene:SORBI_3003G131900	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DMP
PANTHER:PTHR31621	PANTHER:PTHR31621:SF2	PFAM:PF05078	ProteinID:KXG32269	ProteinID:KXG32269.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI00081ADE2F	UniProt:A0A1B6Q2X1	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr3:-:12390557..12391656

Molecular Weight (calculated)

24641.5 Da

IEP (calculated)

7.460

GRAVY (calculated)

0.096

Length

231 amino acids

Sequence
(BLAST)

001: MDPNAVRIQM PTTASQEEEP SSTQDATKKK QKPPPQQTAA TPGAPAPPVR PAALSCASSD LLKLLPTGTV LAFQALAPSF SNHGVCHEAN RYLVLSLVGA
101: CTASCVLLSF TDSLVGRDGK LYHGAATFGG FYPFNYAGTR EEREATFKDL SRFRITALDL VHAFFSALVF LAVAFADASI QGCLFPDAGP DVRQLLVNLP
201: LGAGFLSSMV FIIFPTTRKS IGYTDMTPHA Q

Best Arabidopsis Sequence Match ( AT3G02430.1 )
(BLAST)

001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR

Arabidopsis Description

DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.