Factsheet for GSMUA_AchrUn_randomP16150_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G159400.1	Wheat	peroxisome	55.84	51.64
TraesCS2A01G153900.1	Wheat	cytosol, peroxisome, vacuole	55.33	51.17
HORVU6Hr1G022610.1	Barley	plasma membrane	54.31	50.47
TraesCS6D01G113400.1	Wheat	plastid	54.31	50.0
TraesCS6A01G123100.1	Wheat	plastid	53.81	49.3
Os01t0388700-01	Rice	cytosol, peroxisome, plasma membrane	55.84	48.89
TraesCS6D01G113300.1	Wheat	plastid	53.3	48.84
TraesCS6B01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	53.3	48.61
TraesCS2B01G179200.1	Wheat	cytosol, peroxisome, vacuole	54.82	47.58
KXG32269	Sorghum	cytosol, peroxisome, plasma membrane	52.28	44.59
HORVU1Hr1G067430.1	Barley	mitochondrion	51.27	44.49
Zm00001d008235_P001	Maize	golgi, peroxisome, plasma membrane	51.27	44.49
Os01t0368700-01	Rice	cytosol, plasma membrane	48.22	42.22
Zm00001d045826_P001	Maize	plasma membrane	37.56	40.88
HORVU2Hr1G027720.1	Barley	mitochondrion, plastid	46.19	40.09
GSMUA_Achr11P...	Banana	plasma membrane	38.07	38.07
KXG19859	Sorghum	plasma membrane	43.65	37.89
AT5G27370.1	Thale cress	plasma membrane	36.55	37.7
GSMUA_Achr4P10580_001	Banana	cytosol	39.09	37.02
GSMUA_Achr7P23290_001	Banana	endoplasmic reticulum	40.61	36.7
GSMUA_Achr8P19660_001	Banana	cytosol	37.56	36.27
GSMUA_Achr6P08370_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	35.53	36.08
GSMUA_Achr4P02720_001	Banana	plasma membrane	38.07	35.55
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	35.03	32.7
GSMUA_Achr10P...	Banana	plastid	34.52	32.54
GSMUA_Achr10P...	Banana	cytosol	37.56	31.76
GSMUA_Achr8P32620_001	Banana	plasma membrane	34.01	31.02
TraesCS6B01G469800.1	Wheat	plastid	38.58	30.77
TraesCS6D01G407200.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	39.09	30.56
Os01t0368500-00	Rice	golgi, nucleus, plasma membrane	49.24	30.5
TraesCS4D01G004900.1	Wheat	plastid	38.58	30.4
TraesCS6D01G407100.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	39.09	30.2
TraesCS5A01G470700.1	Wheat	cytosol, golgi, peroxisome	38.58	30.04
TraesCS5D01G483300.1	Wheat	cytosol, golgi, peroxisome	38.58	29.8
GSMUA_Achr5P26860_001	Banana	plasma membrane	52.79	23.53

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP16150_001	EnsemblPlants:GSMUA_AchrUn_randomT16150_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG16150_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PFAM:PF05078	SEG:seg	TMHMM:TMhelix	UniParc:UPI000296C46B
UniProt:M0U9M4	MapMan:35.1	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG16150_001]

Coordinates

chrchrUn_random:-:75991937..75992530

Molecular Weight (calculated)

21157.7 Da

IEP (calculated)

8.329

GRAVY (calculated)

0.242

Length

197 amino acids

Sequence
(BLAST)

001: MEQQQQQSAP PSAVVNKTVS SVASLVKLLP SGTVLAFQAL APPFSNRGAC RRSNRYLTAA LIHLCAAACA LLSLTDSLRG GDGKLYYGIA TLGGLHVVNY
101: EGEEEERGRV LRDLRRYRLR VRDGVHAVLG VVMFLAVAFS DADVVECFFP EVGAEVRQLL VNLPLGAGLV ASVVFVMFPT TRKGVGYADT AHHTELS

Best Arabidopsis Sequence Match ( AT3G02430.1 )
(BLAST)

001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR

Arabidopsis Description

DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.