Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, cytosol
Predictor Summary:
Predictor Summary:
- golgi 1
- mitochondrion 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G470700.1 | Wheat | cytosol, golgi, peroxisome | 95.29 | 96.05 |
| TraesCS6B01G469800.1 | Wheat | plastid | 79.22 | 81.78 |
| TraesCS6D01G407200.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 79.61 | 80.56 |
| TraesCS4D01G004900.1 | Wheat | plastid | 77.65 | 79.2 |
| TraesCS6D01G407100.1 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 78.43 | 78.43 |
| TraesCS7D01G133200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 30.59 | 43.58 |
| TraesCS2D01G159400.1 | Wheat | peroxisome | 35.29 | 42.25 |
| TraesCS6D01G113400.1 | Wheat | plastid | 34.9 | 41.59 |
| TraesCS6D01G113300.1 | Wheat | plastid | 34.51 | 40.93 |
| GSMUA_AchrUn_... | Banana | plastid | 29.8 | 38.58 |
| AT5G27370.1 | Thale cress | plasma membrane | 27.06 | 36.13 |
| TraesCS7D01G479400.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.51 | 35.92 |
| TraesCS2D01G054400.1 | Wheat | plastid | 32.16 | 35.81 |
| TraesCS6D01G372500.1 | Wheat | plastid | 33.73 | 35.54 |
| TraesCS6D01G372600.1 | Wheat | plastid | 32.16 | 35.5 |
| TraesCS6D01G372400.1 | Wheat | plastid | 31.37 | 35.09 |
| TraesCS6D01G372300.1 | Wheat | plastid | 32.16 | 34.89 |
| TraesCS7D01G479500.1 | Wheat | plastid | 33.33 | 34.55 |
| TraesCS2D01G054300.1 | Wheat | plastid | 32.55 | 34.3 |
| Os01t0368500-00 | Rice | golgi, nucleus, plasma membrane | 41.96 | 33.65 |
| TraesCS7D01G479700.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 32.55 | 33.6 |
| TraesCS7D01G428000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 21.96 | 33.53 |
| TraesCS6D01G372200.1 | Wheat | plastid | 29.8 | 33.19 |
| TraesCS4D01G135800.1 | Wheat | plastid | 28.24 | 32.88 |
| TraesCS7D01G547500.1 | Wheat | peroxisome, plasma membrane, vacuole | 25.49 | 31.4 |
| TraesCS2D01G145200.1 | Wheat | cytosol, peroxisome, vacuole | 25.88 | 31.28 |
| TraesCS7D01G320400.1 | Wheat | plastid | 27.84 | 31.0 |
| TraesCS7D01G547000.1 | Wheat | plastid | 28.24 | 29.88 |
| TraesCS1D01G403800.1 | Wheat | plasma membrane | 25.49 | 29.55 |
| TraesCS3D01G402600.1 | Wheat | plasma membrane | 25.1 | 28.83 |
| TraesCS7D01G547800.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 27.06 | 27.38 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 21.57 | 25.7 |
| TraesCS2D01G054200.1 | Wheat | plasma membrane | 27.45 | 18.52 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G483300.1 | EnsemblPlantsGene:TraesCS5D01G483300 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF27 | PFAM:PF05078 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5D:-:520137574..520138341
Molecular Weight (calculated)
27664.6 Da
IEP (calculated)
8.491
GRAVY (calculated)
-0.233
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGGGNKEKK EEAPKPTATG RGGSSLYDKT LSTASNLARL LPTGTTTAFQ TLAPSFTNHG ECLPVNRYFT WALIFFLGVL CALISFTDSV TDRHGNTRYG
101: FVHPCGFTPF NSVPHGDGTV PIDERESKRR RMRGRDWLHS VFRFVVFVSL AFCDSGVQKC LVPRESQQWR EFLVNMPLAS GFLASFVFMI FPSSRHGIGA
201: GPGAPAALDN LTDTNADADA AVKSDPPKNS KSAPAAADTR VAPSTSYDYE LHHAV
101: FVHPCGFTPF NSVPHGDGTV PIDERESKRR RMRGRDWLHS VFRFVVFVSL AFCDSGVQKC LVPRESQQWR EFLVNMPLAS GFLASFVFMI FPSSRHGIGA
201: GPGAPAALDN LTDTNADADA AVKSDPPKNS KSAPAAADTR VAPSTSYDYE LHHAV
001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
Arabidopsis Description
DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.