Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- plastid 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G055400.1 | Wheat | plastid | 92.56 | 92.56 |
| TraesCS2A01G055600.1 | Wheat | plastid | 86.78 | 91.7 |
| TraesCS2B01G068500.1 | Wheat | plastid | 85.12 | 89.96 |
| TraesCS6D01G372500.1 | Wheat | plastid | 86.78 | 86.78 |
| TraesCS6D01G372300.1 | Wheat | plastid | 80.58 | 82.98 |
| TraesCS2D01G054400.1 | Wheat | plastid | 73.55 | 77.73 |
| TraesCS6D01G372400.1 | Wheat | plastid | 72.31 | 76.75 |
| TraesCS6D01G372600.1 | Wheat | plastid | 69.42 | 72.73 |
| TraesCS6D01G372200.1 | Wheat | plastid | 68.18 | 72.05 |
| TraesCS7D01G133200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 52.89 | 71.51 |
| OQU76129 | Sorghum | plastid | 59.5 | 63.44 |
| TraesCS7D01G479500.1 | Wheat | plastid | 64.46 | 63.41 |
| KXG19680 | Sorghum | plastid | 63.64 | 63.11 |
| TraesCS7D01G479400.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.4 | 61.63 |
| TraesCS7D01G479700.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 62.4 | 61.13 |
| Zm00001d044777_P001 | Maize | plastid | 61.98 | 58.82 |
| Os01t0389700-01 | Rice | plastid | 56.61 | 57.08 |
| Os01t0389200-01 | Rice | cytosol | 54.55 | 50.0 |
| TraesCS2D01G159400.1 | Wheat | peroxisome | 43.39 | 49.3 |
| TraesCS6D01G113300.1 | Wheat | plastid | 41.74 | 46.98 |
| TraesCS6D01G113400.1 | Wheat | plastid | 41.32 | 46.73 |
| TraesCS2D01G054200.1 | Wheat | plasma membrane | 70.66 | 45.24 |
| TraesCS7D01G547000.1 | Wheat | plastid | 43.39 | 43.57 |
| TraesCS7D01G547500.1 | Wheat | peroxisome, plasma membrane, vacuole | 35.12 | 41.06 |
| TraesCS7D01G547800.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 41.74 | 40.08 |
| AT5G27370.1 | Thale cress | plasma membrane | 30.58 | 38.74 |
| TraesCS2D01G145200.1 | Wheat | cytosol, peroxisome, vacuole | 30.99 | 35.55 |
| TraesCS7D01G320400.1 | Wheat | plastid | 32.64 | 34.5 |
| TraesCS4D01G135800.1 | Wheat | plastid | 30.99 | 34.25 |
| TraesCS5D01G483300.1 | Wheat | cytosol, golgi, peroxisome | 34.3 | 32.55 |
| TraesCS1D01G403800.1 | Wheat | plasma membrane | 29.34 | 32.27 |
| TraesCS6D01G407100.1 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 33.88 | 32.16 |
| TraesCS6D01G407200.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 33.47 | 32.14 |
| TraesCS4D01G004900.1 | Wheat | plastid | 33.06 | 32.0 |
| TraesCS7D01G428000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 21.9 | 31.74 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 27.27 | 30.84 |
| TraesCS3D01G402600.1 | Wheat | plasma membrane | 27.69 | 30.18 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 40.91 | 22.4 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G054300.1 | EnsemblPlantsGene:TraesCS2D01G054300 | InterPro:DMP | PANTHER:PTHR31621 | PFAM:PF05078 | SEG:seg |
| TMHMM:TMhelix | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:21681319..21682155
Molecular Weight (calculated)
26621.7 Da
IEP (calculated)
5.650
GRAVY (calculated)
0.029
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSSLSST AIQIHPLTKE DDHEITVART APPMTTKGPA PATVMSSVAN LAQLLPTGTV LAYQALSPSF TNHGKCETSN QWLTGTLVTV LAFACLFFSF
101: TDSIVGRRDG KLYYGFATPC GFNVFNFSSE EERQEWNDLD QFRRLRLRPL DFMHAFFAAV VFLTVAFSDV GLQNCFFPDA NRNTEELLKN LPMGMAFLSS
201: FVFVIFPTKR KGIGFSDNAP PQKEIFTQSD LTTPLLSGVE GA
101: TDSIVGRRDG KLYYGFATPC GFNVFNFSSE EERQEWNDLD QFRRLRLRPL DFMHAFFAAV VFLTVAFSDV GLQNCFFPDA NRNTEELLKN LPMGMAFLSS
201: FVFVIFPTKR KGIGFSDNAP PQKEIFTQSD LTTPLLSGVE GA
001: MEASFIRSLP SAGNFANLLP TGTALIFETL LPSFSNGGEC NNKPVNKLLT ITLISFCAAA CFFSSFTDSY VGQDGRIYYG IATSNGLHIL NDYPDEGYDP
101: ESGLTADKRE RYKLSFVDFV HAFVSVIVFL ALAVESSDFR RCLLPEDDEN SWGGHFVLMI KYFAVMVLTM ASFFFAIFPS KRRGIGISDI R
101: ESGLTADKRE RYKLSFVDFV HAFVSVIVFL ALAVESSDFR RCLLPEDDEN SWGGHFVLMI KYFAVMVLTM ASFFFAIFPS KRRGIGISDI R
Arabidopsis Description
DMP10Protein DMP10 [Source:UniProtKB/Swiss-Prot;Acc:Q3E912]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.