Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 1
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G427800.1 | Wheat | plastid | 95.24 | 95.24 |
| TraesCS6A01G388800.1 | Wheat | plastid | 93.94 | 93.94 |
| TraesCS2D01G054400.1 | Wheat | plastid | 77.06 | 77.73 |
| TraesCS6D01G372400.1 | Wheat | plastid | 76.62 | 77.63 |
| TraesCS6D01G372200.1 | Wheat | plastid | 73.59 | 74.24 |
| TraesCS6D01G372300.1 | Wheat | plastid | 74.46 | 73.19 |
| TraesCS6D01G372500.1 | Wheat | plastid | 75.76 | 72.31 |
| TraesCS7D01G133200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 55.41 | 71.51 |
| TraesCS2D01G054300.1 | Wheat | plastid | 72.73 | 69.42 |
| OQU76129 | Sorghum | plastid | 66.67 | 67.84 |
| TraesCS7D01G479400.1 | Wheat | cytosol, peroxisome, plasma membrane | 67.97 | 64.08 |
| TraesCS7D01G479700.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 68.4 | 63.97 |
| KXG19680 | Sorghum | plastid | 67.1 | 63.52 |
| TraesCS7D01G479500.1 | Wheat | plastid | 67.53 | 63.41 |
| Os01t0389700-01 | Rice | plastid | 60.61 | 58.33 |
| Zm00001d044777_P001 | Maize | plastid | 62.77 | 56.86 |
| Os01t0389200-01 | Rice | cytosol | 61.04 | 53.41 |
| TraesCS2D01G159400.1 | Wheat | peroxisome | 46.32 | 50.23 |
| TraesCS7D01G547000.1 | Wheat | plastid | 47.62 | 45.64 |
| TraesCS6D01G113300.1 | Wheat | plastid | 42.42 | 45.58 |
| TraesCS6D01G113400.1 | Wheat | plastid | 41.99 | 45.33 |
| TraesCS7D01G547500.1 | Wheat | peroxisome, plasma membrane, vacuole | 38.53 | 43.0 |
| TraesCS7D01G547800.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 45.45 | 41.67 |
| TraesCS2D01G054200.1 | Wheat | plasma membrane | 60.17 | 36.77 |
| AT5G27370.1 | Thale cress | plasma membrane | 30.3 | 36.65 |
| TraesCS7D01G428000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 26.41 | 36.53 |
| TraesCS7D01G320400.1 | Wheat | plastid | 34.63 | 34.93 |
| TraesCS2D01G145200.1 | Wheat | cytosol, peroxisome, vacuole | 29.87 | 32.7 |
| TraesCS6D01G407100.1 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 35.93 | 32.55 |
| TraesCS6D01G407200.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 35.5 | 32.54 |
| TraesCS5D01G483300.1 | Wheat | cytosol, golgi, peroxisome | 35.5 | 32.16 |
| TraesCS4D01G004900.1 | Wheat | plastid | 34.63 | 32.0 |
| TraesCS4D01G135800.1 | Wheat | plastid | 29.44 | 31.05 |
| TraesCS3D01G402600.1 | Wheat | plasma membrane | 29.44 | 30.63 |
| TraesCS1D01G403800.1 | Wheat | plasma membrane | 27.27 | 28.64 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 25.11 | 27.1 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 43.72 | 22.85 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G372600.1 | EnsemblPlantsGene:TraesCS6D01G372600 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF24 | PFAM:PF05078 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6D:-:457638167..457638862
Molecular Weight (calculated)
25014.6 Da
IEP (calculated)
6.787
GRAVY (calculated)
0.046
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSPSST VTQVSPPTND VDDGKITAAG AALPTPTTDR VMSGVANLAQ LLPTGTVLTY QALSPSFTNH GKCETSSSNQ WLTAALVAVL AAVCIFFSFT
101: DSVIGHHDGK LYYGVATTHG FNVFNFSDED ERREWSGLDE FRRLRLQPLD FVHGFFAAVV FLTVAFSDVG LQNCFFPDAG RNTQELLKNL PLGMAFLSSS
201: VFIIFPTKRK GIGFNDTTPR QKVIHPSLNK V
101: DSVIGHHDGK LYYGVATTHG FNVFNFSDED ERREWSGLDE FRRLRLQPLD FVHGFFAAVV FLTVAFSDVG LQNCFFPDAG RNTQELLKNL PLGMAFLSSS
201: VFIIFPTKRK GIGFNDTTPR QKVIHPSLNK V
001: MEASFIRSLP SAGNFANLLP TGTALIFETL LPSFSNGGEC NNKPVNKLLT ITLISFCAAA CFFSSFTDSY VGQDGRIYYG IATSNGLHIL NDYPDEGYDP
101: ESGLTADKRE RYKLSFVDFV HAFVSVIVFL ALAVESSDFR RCLLPEDDEN SWGGHFVLMI KYFAVMVLTM ASFFFAIFPS KRRGIGISDI R
101: ESGLTADKRE RYKLSFVDFV HAFVSVIVFL ALAVESSDFR RCLLPEDDEN SWGGHFVLMI KYFAVMVLTM ASFFFAIFPS KRRGIGISDI R
Arabidopsis Description
DMP10Protein DMP10 [Source:UniProtKB/Swiss-Prot;Acc:Q3E912]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.