Factsheet for TraesCS3D01G245600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	77.57	88.77
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	85.51	83.94
KXG33079	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	72.9	75.0
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	70.56	72.6
GSMUA_Achr4P02720_001	Banana	plasma membrane	60.28	61.14
GSMUA_Achr4P10580_001	Banana	cytosol	57.94	59.62
TraesCS1D01G403800.1	Wheat	plasma membrane	57.94	56.36
PGSC0003DMT400081227	Potato	plasma membrane	50.47	51.67
Solyc02g077640.1.1	Tomato	plasma membrane	49.07	50.24
VIT_13s0106g00720.t01	Wine grape	plasma membrane	49.53	50.24
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	49.53	50.24
AT5G46090.1	Thale cress	plasma membrane	47.66	47.66
KRH20387	Soybean	plasma membrane	48.13	47.47
CDY55785	Canola	cytosol, peroxisome, plasma membrane	47.2	47.2
CDX76524	Canola	cytosol, peroxisome, plasma membrane	47.2	47.2
CDX76523	Canola	cytosol, peroxisome, plasma membrane	47.2	47.2
KRH55890	Soybean	plasma membrane	45.33	46.86
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.73	46.73
AT4G18425.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	46.26	46.48
VIT_12s0028g03070.t01	Wine grape	plasma membrane	45.79	45.79
Solyc10g008970.1.1	Tomato	plasma membrane	46.26	45.21
CDY33452	Canola	plasma membrane	45.79	45.16
VIT_10s0003g00320.t01	Wine grape	plasma membrane	51.4	44.9
Bra025039.1-P	Field mustard	plasma membrane	45.33	44.7
PGSC0003DMT400035732	Potato	plasma membrane	46.26	44.39
CDY60883	Canola	cytosol	46.26	44.2
CDY34571	Canola	plasma membrane	44.39	43.78
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	45.79	43.75
CDX78854	Canola	cytosol, peroxisome, plasma membrane	45.79	43.75
CDX77630	Canola	plasma membrane	43.46	42.86
Solyc12g005490.1.1	Tomato	plasma membrane	44.86	42.67
CDX77629	Canola	cytosol, peroxisome, plasma membrane	46.73	41.49
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.73	41.49
CDY70034	Canola	cytosol, peroxisome, plasma membrane	46.73	41.49
TraesCS4D01G135800.1	Wheat	plastid	40.65	39.73
KRH50120	Soybean	peroxisome	38.32	39.42
TraesCS7D01G320400.1	Wheat	plastid	37.38	34.93
TraesCS2D01G145200.1	Wheat	cytosol, peroxisome, vacuole	31.78	32.23
TraesCS7D01G133200.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	26.64	31.84
TraesCS6D01G113400.1	Wheat	plastid	31.78	31.78
CDY38243	Canola	cytosol	20.09	31.62
TraesCS6D01G113300.1	Wheat	plastid	31.31	31.16
TraesCS2D01G159400.1	Wheat	peroxisome	30.84	30.99
TraesCS7D01G428000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	22.43	28.74
TraesCS2D01G054400.1	Wheat	plastid	30.37	28.38
TraesCS7D01G547500.1	Wheat	peroxisome, plasma membrane, vacuole	26.64	27.54
TraesCS2D01G054300.1	Wheat	plastid	30.84	27.27
TraesCS3D01G402600.1	Wheat	plasma membrane	28.04	27.03
TraesCS6D01G372500.1	Wheat	plastid	30.37	26.86
TraesCS6D01G372300.1	Wheat	plastid	28.97	26.38
TraesCS6D01G372400.1	Wheat	plastid	27.57	25.88
TraesCS6D01G372200.1	Wheat	plastid	27.1	25.33
TraesCS7D01G479500.1	Wheat	plastid	28.97	25.2
TraesCS6D01G372600.1	Wheat	plastid	27.1	25.11
TraesCS7D01G479400.1	Wheat	cytosol, peroxisome, plasma membrane	28.5	24.9
TraesCS7D01G479700.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	28.5	24.7
TraesCS7D01G547000.1	Wheat	plastid	25.7	22.82
TraesCS6D01G407200.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	26.64	22.62
TraesCS6D01G407100.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	26.64	22.35
TraesCS7D01G547800.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	26.17	22.22
TraesCS4D01G004900.1	Wheat	plastid	25.7	22.0
TraesCS5D01G483300.1	Wheat	cytosol, golgi, peroxisome	25.7	21.57
TraesCS2D01G054200.1	Wheat	plasma membrane	25.7	14.55

Protein Annotations

EnsemblPlants:TraesCS3D01G245600.1	EnsemblPlantsGene:TraesCS3D01G245600	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF0	PFAM:PF05078
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:341885767..341886411

Molecular Weight (calculated)

23411.3 Da

IEP (calculated)

8.236

GRAVY (calculated)

0.168

Length

214 amino acids

Sequence
(BLAST)

001: MELQKDQRHP LLSNRTDGTN NMSPTQKAIG QAYQSTGHLA KLLPSGTVLA FQLLAPTMAK HGHCGDLDRM MTGGLVVLCA LSCFVLSFTD SFRDENGKVR
101: YGFATFKGLW VIDGGVTLDP HAAVEYKIQF LDFFHATVSA TIFVAIALFD QNVASCFYPI PSEDTKQVLT TVPVAIGVIG SMLFVSFPTT RHGIASQSLH
201: NSWVFKRFVR SSSC

Best Arabidopsis Sequence Match ( AT5G46090.1 )
(BLAST)

001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK

Arabidopsis Description

DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.