CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 2
nucleus 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081227	Potato	plasma membrane	69.67	70.33
KRH20387	Soybean	plasma membrane	70.62	68.66
VIT_13s0106g00720.t01	Wine grape	plasma membrane	68.25	68.25
Solyc02g077640.1.1	Tomato	plasma membrane	67.3	67.94
GSMUA_Achr4P10580_001	Banana	cytosol	60.66	61.54
AT4G18425.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	59.72	59.15
KRH50120	Soybean	peroxisome	57.82	58.65
CDX76523	Canola	cytosol, peroxisome, plasma membrane	59.24	58.41
CDX76524	Canola	cytosol, peroxisome, plasma membrane	59.24	58.41
CDY55785	Canola	cytosol, peroxisome, plasma membrane	59.24	58.41
AT5G46090.1	Thale cress	plasma membrane	58.77	57.94
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.77	57.94
GSMUA_Achr4P02720_001	Banana	plasma membrane	56.87	56.87
CDX78854	Canola	cytosol, peroxisome, plasma membrane	60.19	56.7
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.19	56.7
CDY60883	Canola	cytosol	59.72	56.25
VIT_10s0003g00320.t01	Wine grape	plasma membrane	64.45	55.51
Bra025039.1-P	Field mustard	plasma membrane	56.4	54.84
CDY33452	Canola	plasma membrane	55.92	54.38
KXG33079	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	53.08	53.85
CDY34571	Canola	plasma membrane	54.5	53.0
CDX77630	Canola	plasma membrane	54.5	53.0
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	51.66	52.4
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.72	52.28
CDX77629	Canola	cytosol, peroxisome, plasma membrane	59.72	52.28
CDY70034	Canola	cytosol, peroxisome, plasma membrane	59.72	52.28
KRH55890	Soybean	plasma membrane	51.18	52.17
Os05t0562800-02	Rice	plastid	58.77	52.1
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	45.5	51.34
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	51.18	49.54
TraesCS3D01G245600.1	Wheat	cytosol, peroxisome, plasma membrane	50.24	49.53
HORVU1Hr1G087380.1	Barley	mitochondrion	57.35	49.39
CDY38243	Canola	cytosol	27.01	41.91
Os06t0352200-01	Rice	plasma membrane, plastid	48.34	40.32
KRG98781	Soybean	plasma membrane	35.55	35.05
KRG98790	Soybean	plasma membrane	35.07	34.58
KRH50952	Soybean	plasma membrane, plastid	35.07	33.33
KRH20960	Soybean	plastid	31.75	32.84
KRH50953	Soybean	plastid	33.65	32.27
KRH02164	Soybean	endoplasmic reticulum	31.75	32.06
KRH70214	Soybean	peroxisome	31.28	30.28
KRH08569	Soybean	peroxisome	30.33	29.22

Protein Annotations

MapMan:35.1	EMBL:ACUP02008354	InterPro:DMP	EnsemblPlantsGene:GLYMA_13G235100	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0008150	GO:GO:0009705
GO:GO:0009987	GO:GO:0010256	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	UniProt:I1M1Z2
EnsemblPlants:KRH21356	ProteinID:KRH21356	ProteinID:KRH21356.1	PFAM:PF05078	PANTHER:PTHR31621	PANTHER:PTHR31621:SF0
TMHMM:TMhelix	UniParc:UPI00023CEEED	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:34583343..34584299

Molecular Weight (calculated)

22876.6 Da

IEP (calculated)

4.616

GRAVY (calculated)

0.280

Length

211 amino acids

Sequence
(BLAST)

001: MDIKIESDDS QNEENEERLP LLRNSEVPEA ERNLIQKAIS QTFQSTAHLG NLLPTGTVLA FQLLSPIFTN VGNCDSVSKA MTAALVSLCG ASCFMSCLTD
101: SFRDSKGSIC YGFATLRGLW VIDGSTTLPP QLAAKYRLKL IDFMHAVMSV LVFAAIALFD QNVVNCFFPA PSTETQEILT ALPVGIGVLG SMFFVAFPTQ
201: RHGIGFPLST D

Best Arabidopsis Sequence Match ( AT4G18425.1 )
(BLAST)

001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK

Arabidopsis Description

DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.