CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
endoplasmic reticulum 2
plasma membrane 3
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g02280.t01	Wine grape	plastid	60.29	64.06
AT3G21550.1	Thale cress	plasma membrane	51.47	57.07
CDY38623	Canola	plasma membrane	51.47	56.76
PGSC0003DMT400081771	Potato	extracellular	48.04	56.32
Bra031289.1-P	Field mustard	plasma membrane	50.98	56.22
CDY44328	Canola	plasma membrane	50.98	56.22
GSMUA_Achr11P...	Banana	plasma membrane	53.92	55.84
Solyc01g080490.2.1	Tomato	extracellular	47.55	55.75
Bra023874.1-P	Field mustard	plasma membrane	49.51	54.59
CDY37280	Canola	plasma membrane	49.02	54.05
CDY19288	Canola	extracellular, plasma membrane, vacuole	48.53	53.51
KRH50952	Soybean	plasma membrane, plastid	57.84	53.15
KRH02164	Soybean	endoplasmic reticulum	54.41	53.11
KRH50953	Soybean	plastid	56.37	52.27
HORVU7Hr1G100090.1	Barley	plasma membrane	48.53	51.3
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	48.04	50.78
Zm00001d047420_P001	Maize	plasma membrane	46.57	50.53
Os03t0370400-01	Rice	plastid	47.55	50.26
TraesCS7B01G337100.1	Wheat	plasma membrane	47.55	50.26
EER94799	Sorghum	plasma membrane	47.06	49.74
TraesCS7D01G428000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	39.22	47.9
KRH55890	Soybean	plasma membrane	38.24	37.68
KRH20387	Soybean	plasma membrane	35.29	33.18
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	32.84	31.75
KRH70214	Soybean	peroxisome	30.88	28.9
KRH08569	Soybean	peroxisome	30.88	28.77
KRG98781	Soybean	plasma membrane	29.9	28.5
KRG98790	Soybean	plasma membrane	29.41	28.04
KRH50120	Soybean	peroxisome	26.96	26.44

Protein Annotations

MapMan:35.1	EMBL:ACUP02008331	InterPro:DMP	EnsemblPlantsGene:GLYMA_13G212400	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0008150	GO:GO:0009705
GO:GO:0009987	GO:GO:0010256	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	UniProt:I1M189
EnsemblPlants:KRH20960	ProteinID:KRH20960	ProteinID:KRH20960.1	PFAM:PF05078	PANTHER:PTHR31621	PANTHER:PTHR31621:SF1
TMHMM:TMhelix	UniParc:UPI000233BF28	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:32599016..32599912

Molecular Weight (calculated)

21997.3 Da

IEP (calculated)

8.622

GRAVY (calculated)

0.205

Length

204 amino acids

Sequence
(BLAST)

001: MSDKNNMVIA SKTATGSSSS SSRMSTKTFS GLGNLVKLLP TGTVFLFQFL IPVVTNSGHC TTLHKYLTGS FLVVCAFNCA FASFTDSYTG SDGERHYALV
101: TAKGLWPSPA SESVNLSAYK LRFGDFVHAF FSLVVFAVLG LLDTNTVRCF YPAFESAEKI LMQVVPPVIG AVASTVFVMF PNNRHGIGYP TSSDSNDTQH
201: KSQT

Best Arabidopsis Sequence Match ( AT3G21550.1 )
(BLAST)

001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK

Arabidopsis Description

DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.