Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- plasma membrane 4
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031289.1-P | Field mustard | plasma membrane | 99.46 | 99.46 |
| CDY44328 | Canola | plasma membrane | 98.38 | 98.38 |
| CDY37280 | Canola | plasma membrane | 92.97 | 92.97 |
| CDY19288 | Canola | extracellular, plasma membrane, vacuole | 92.43 | 92.43 |
| AT3G21550.1 | Thale cress | plasma membrane | 90.27 | 90.76 |
| VIT_05s0020g02280.t01 | Wine grape | plastid | 67.57 | 65.1 |
| PGSC0003DMT400081771 | Potato | extracellular | 58.38 | 62.07 |
| Solyc01g080490.2.1 | Tomato | extracellular | 57.3 | 60.92 |
| GSMUA_Achr11P... | Banana | plasma membrane | 61.08 | 57.36 |
| KRH20960 | Soybean | plastid | 56.76 | 51.47 |
| Zm00001d047420_P001 | Maize | plasma membrane | 48.65 | 47.87 |
| EER94799 | Sorghum | plasma membrane | 48.65 | 46.63 |
| Os03t0370400-01 | Rice | plastid | 48.11 | 46.11 |
| KRH50953 | Soybean | plastid | 54.59 | 45.91 |
| TraesCS7B01G337100.1 | Wheat | plasma membrane | 47.57 | 45.6 |
| TraesCS7A01G438100.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 47.57 | 45.6 |
| KRH02164 | Soybean | endoplasmic reticulum | 51.35 | 45.45 |
| HORVU7Hr1G100090.1 | Barley | plasma membrane | 46.49 | 44.56 |
| KRH50952 | Soybean | plasma membrane, plastid | 52.43 | 43.69 |
| CDY19287 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 47.03 | 43.07 |
| CDY37281 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 45.95 | 42.08 |
| TraesCS7D01G428000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 37.84 | 41.92 |
| CDY38622 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 45.41 | 41.18 |
| CDY38387 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 40.0 | 37.0 |
| CDY35189 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 39.46 | 36.5 |
| CDX92877 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 39.46 | 36.5 |
| CDY29909 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 39.46 | 36.5 |
| CDY03457 | Canola | plastid | 41.62 | 35.65 |
| CDY44329 | Canola | endoplasmic reticulum, extracellular, vacuole | 8.65 | 35.56 |
| CDY34278 | Canola | plasma membrane, plastid | 41.62 | 35.0 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 39.46 | 34.11 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 39.46 | 34.11 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 39.46 | 34.11 |
| CDY33452 | Canola | plasma membrane | 39.46 | 33.64 |
| CDY08933 | Canola | plasma membrane | 40.0 | 33.48 |
| CDY24837 | Canola | plasma membrane, plastid | 39.46 | 33.33 |
| CDX77630 | Canola | plasma membrane | 38.92 | 33.18 |
| CDY34571 | Canola | plasma membrane | 38.38 | 32.72 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 39.46 | 32.59 |
| CDY60883 | Canola | cytosol | 38.92 | 32.14 |
| CDY34728 | Canola | plasma membrane, plastid | 38.38 | 32.13 |
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 36.22 | 27.8 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 36.22 | 27.8 |
| CDY34726 | Canola | cytosol, extracellular, peroxisome | 22.7 | 26.25 |
| CDX74441 | Canola | plastid | 30.81 | 23.36 |
| CDX81135 | Canola | plastid | 29.73 | 22.73 |
| CDY56548 | Canola | plastid | 29.19 | 22.31 |
| CDY38243 | Canola | cytosol | 15.68 | 21.32 |
| CDY30259 | Canola | plastid | 14.05 | 19.55 |
Protein Annotations
| EnsemblPlants:CDY38623 | EnsemblPlantsGene:GSBRNA2T00066316001 | GO:A0A078HPC3 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF1 | PFAM:PF05078 | ProteinID:CDY38623 | ProteinID:CDY38623.1 |
| TMHMM:TMhelix | UniParc:UPI0004EEBC32 | UniProt:A0A078HPC3 | MapMan:35.1 | : | : |
Description
BnaA05g19640DBnaA05g19640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HPC3]
Coordinates
chrLK032428:-:73128..73867
Molecular Weight (calculated)
20343.5 Da
IEP (calculated)
7.806
GRAVY (calculated)
0.293
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTTFKAIRD RTYSGVGDLI RLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGALIVVCA FSCCFTCFTD SYRTSDGYVH YGVATVKGLW PDSSSKDLSS
101: YRLRVGDFVH AFFSLIVFSV ISLLDSNTVN CFYPGFGSTG KIFLMVLPPV IGVISGTVFT VFPSRRHGIG NPSENNDENA SEMEK
101: YRLRVGDFVH AFFSLIVFSV ISLLDSNTVN CFYPGFGSTG KIFLMVLPPV IGVISGTVFT VFPSRRHGIG NPSENNDENA SEMEK
001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK
Arabidopsis Description
DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.