CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 2
endoplasmic reticulum 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50952	Soybean	plasma membrane, plastid	74.16	69.82
KRH50953	Soybean	plastid	69.38	65.91
VIT_05s0020g02280.t01	Wine grape	plastid	52.15	56.77
KRH20960	Soybean	plastid	53.11	54.41
AT3G21550.1	Thale cress	plasma membrane	45.93	52.17
PGSC0003DMT400081771	Potato	extracellular	43.06	51.72
Bra031289.1-P	Field mustard	plasma membrane	45.45	51.35
CDY38623	Canola	plasma membrane	45.45	51.35
Solyc01g080490.2.1	Tomato	extracellular	42.58	51.15
Bra023874.1-P	Field mustard	plasma membrane	44.98	50.81
CDY37280	Canola	plasma membrane	44.98	50.81
CDY44328	Canola	plasma membrane	44.98	50.81
CDY19288	Canola	extracellular, plasma membrane, vacuole	44.5	50.27
GSMUA_Achr11P...	Banana	plasma membrane	47.37	50.25
TraesCS7B01G337100.1	Wheat	plasma membrane	44.02	47.67
HORVU7Hr1G100090.1	Barley	plasma membrane	43.54	47.15
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	43.54	47.15
Zm00001d047420_P001	Maize	plasma membrane	42.11	46.81
EER94799	Sorghum	plasma membrane	43.06	46.63
Os03t0370400-01	Rice	plastid	42.58	46.11
TraesCS7D01G428000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	35.41	44.31
KRH55890	Soybean	plasma membrane	33.01	33.33
KRH20387	Soybean	plasma membrane	33.49	32.26
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	32.06	31.75
KRH70214	Soybean	peroxisome	28.71	27.52
KRH50120	Soybean	peroxisome	27.27	27.4
KRH08569	Soybean	peroxisome	28.71	27.4
KRG98781	Soybean	plasma membrane	26.79	26.17
KRG98790	Soybean	plasma membrane	25.84	25.23

Protein Annotations

EntrezGene:100786973	MapMan:35.1	EMBL:ACUP02010298	InterPro:DMP	EnsemblPlantsGene:GLYMA_17G020900	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0008150
GO:GO:0009705	GO:GO:0009987	GO:GO:0010256	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
UniProt:K7MJI9	EnsemblPlants:KRH02164	ProteinID:KRH02164	ProteinID:KRH02164.1	PFAM:PF05078	PANTHER:PTHR31621
PANTHER:PTHR31621:SF1	TMHMM:TMhelix	UniParc:UPI00023D4DF7	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:-:1542149..1542778

Molecular Weight (calculated)

22415.6 Da

IEP (calculated)

7.383

GRAVY (calculated)

0.054

Length

209 amino acids

Sequence
(BLAST)

001: MAADNPTRKT NSTSKNGGKG VTNTTFSAFG SLIKLLPTGT VFVFQFLNPV VTNSGECNAT NKWLSSIVLV ACGLSCAFSS FTDSYIGSDN QRHYGIVTPK
101: GLWPFSEPEK SKSVDKLWLG DFVRAALSLL VFAVLGLLDT NTVHCFYPGF EVTQKSLLQV LPTAIGVFAG GVFMIFPDKR NGIGYPLNSN SDSNHTSNIS
201: DETAPIDNA

Best Arabidopsis Sequence Match ( AT3G21550.1 )
(BLAST)

001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK

Arabidopsis Description

DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.