Factsheet for Bra023874.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37280	Canola	plasma membrane	99.46	99.46
CDY19288	Canola	extracellular, plasma membrane, vacuole	97.84	97.84
Bra031289.1-P	Field mustard	plasma membrane	92.97	92.97
AT3G21550.1	Thale cress	plasma membrane	89.19	89.67
PGSC0003DMT400081771	Potato	extracellular	59.46	63.22
VIT_05s0020g02280.t01	Wine grape	plastid	65.41	63.02
Solyc01g080490.2.1	Tomato	extracellular	58.38	62.07
GSMUA_Achr11P...	Banana	plasma membrane	58.92	55.33
KRH20960	Soybean	plastid	54.59	49.51
Zm00001d047420_P001	Maize	plasma membrane	48.11	47.34
EER94799	Sorghum	plasma membrane	48.65	46.63
Os03t0370400-01	Rice	plastid	48.11	46.11
KRH50953	Soybean	plastid	54.59	45.91
KRH02164	Soybean	endoplasmic reticulum	50.81	44.98
TraesCS7B01G337100.1	Wheat	plasma membrane	46.49	44.56
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	46.49	44.56
Bra023875.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	47.57	43.56
HORVU7Hr1G100090.1	Barley	plasma membrane	45.41	43.52
KRH50952	Soybean	plasma membrane, plastid	51.89	43.24
Bra031287.1-P	Field mustard	plasma membrane	47.03	42.65
TraesCS7D01G428000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	37.3	41.32
Bra025039.1-P	Field mustard	plasma membrane	41.08	35.02
Bra011032.1-P	Field mustard	plasma membrane	37.84	35.0
Bra024198.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane, plastid	37.84	35.0
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.92	33.64
Bra013790.1-P	Field mustard	plasma membrane, plastid	40.0	33.64
Bra010492.1-P	Field mustard	plastid	37.3	31.51
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.84	31.25
Bra021460.1-P	Field mustard	plasma membrane, plastid	36.76	30.77
Bra006030.1-P	Field mustard	plasma membrane	28.65	28.04
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.68	27.39
Bra021461.1-P	Field mustard	cytosol, extracellular, peroxisome	21.62	25.0
Bra025657.1-P	Field mustard	plastid	30.81	23.36

Protein Annotations

EnsemblPlants:Bra023874.1	EnsemblPlants:Bra023874.1-P	EnsemblPlantsGene:Bra023874	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF1	PFAM:PF05078	TMHMM:TMhelix	UniParc:UPI000254453E
UniProt:M4E520	MapMan:35.1	:	:	:	:

Description

AT3G21550 (E=2e-096) | unknown protein

Coordinates

chrA01:+:20698740..20699297

Molecular Weight (calculated)

20452.8 Da

IEP (calculated)

8.363

GRAVY (calculated)

0.304

Length

185 amino acids

Sequence
(BLAST)

001: MSTTFKSIRD RTYSGVGDLI RLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGALIVICA FSCCFTCFTD SYRTRDGYVH YGVATMKGLW PDSSSKDLSS
101: YRLRVGDFVH AFFTLIVFSV ISLLDANTVN CFYPGFGSTG KIFLMVLPPV IGVISGIIFT VFPSKRHGIG NPSENNDDKA SELEK

Best Arabidopsis Sequence Match ( AT3G21550.1 )
(BLAST)

001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK

Arabidopsis Description

DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.