Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 4
  • endoplasmic reticulum 1
  • mitochondrion 1
  • cytosol 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, plasma membrane, plastid
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:mitochondrion, plastid
PProwler:plastid
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29909 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 98.5 98.5
CDX92877 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 98.5 98.5
Bra011032.1-P Field mustard plasma membrane 90.0 90.0
AT4G28485.2 Thale cress plasma membrane, plastid 82.0 82.0
Bra025039.1-P Field mustard plasma membrane 47.5 43.78
Bra021010.1-P Field mustard cytosol, peroxisome, plasma membrane 44.5 41.59
Bra013307.1-P Field mustard cytosol, peroxisome, plasma membrane 46.0 41.07
Bra025040.1-P Field mustard cytosol, peroxisome, plasma membrane 48.5 40.25
Bra031289.1-P Field mustard plasma membrane 36.0 38.92
Bra023874.1-P Field mustard plasma membrane 35.0 37.84
Bra010492.1-P Field mustard plastid 41.0 37.44
Bra021460.1-P Field mustard plasma membrane, plastid 40.0 36.2
Bra013790.1-P Field mustard plasma membrane, plastid 39.0 35.45
Bra023875.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid, vacuole 33.5 33.17
Bra006030.1-P Field mustard plasma membrane 31.0 32.8
Bra031287.1-P Field mustard plasma membrane 31.5 30.88
Bra025657.1-P Field mustard plastid 34.5 28.28
Bra021461.1-P Field mustard cytosol, extracellular, peroxisome 22.0 27.5
Protein Annotations
EnsemblPlants:Bra024198.1EnsemblPlants:Bra024198.1-PEnsemblPlantsGene:Bra024198GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:DMPPANTHER:PTHR31621PANTHER:PTHR31621:SF6PFAM:PF05078TMHMM:TMhelixUniParc:UPI0002540C30
UniProt:M4E5Z4MapMan:35.1::::
Description
AT5G46090 (E=2e-051) | unknown protein
Coordinates
chrA03:-:26932830..26933710
Molecular Weight (calculated)
22302.8 Da
IEP (calculated)
9.161
GRAVY (calculated)
0.269
Length
200 amino acids
Sequence
(BLAST)
001: MAETQHLLIS SLPEAPRKPK SKVQKVARKA FKGTAHLSNL LPTGSVMGFQ IMCPVLTHQG QCPTIASRWL TCFLVFVCSV SCFLLSFTDS FRDPRGKVRY
101: GLATPSGLMV MDGTITLTDE EKEKYKLRFI DFMHAIMSML VFFAISMFDQ NVIRCLFPVP SEDTKELLTG LPFIIGVVCG GFFLVFPTRR HGIGSPLTKE
Best Arabidopsis Sequence Match ( AT4G28485.2 )
(BLAST)
001: MEETKQSLIA SLPSAPRKPK SKVERVVRKT FKGTAHLSNL LPTGSVMSFQ IMCPVLTHQG QCPTITSRWL TCFLVSLCAI SCFLFSFTDS IRDPNGKVRY
101: GLATWSGLLV MDGSITLTEE EKEKYKLKIL DFIHAIMSML VFFAVSMFDQ NVTRCLFPVP SEETKEILTS LPFVIGVICG AFFLAFPTRR HGIGSPLTKE
Arabidopsis Description
DMP7Protein DMP7 [Source:UniProtKB/Swiss-Prot;Acc:Q5XV67]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.