Factsheet for Bra021460.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 3
plasma membrane 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34728	Canola	plasma membrane, plastid	99.55	99.55
AT3G02430.1	Thale cress	plastid	85.97	86.76
Bra021461.1-P	Field mustard	cytosol, extracellular, peroxisome	56.11	77.5
Bra010492.1-P	Field mustard	plastid	68.78	69.41
Bra013790.1-P	Field mustard	plasma membrane, plastid	67.87	68.18
Solyc01g103580.2.1	Tomato	plasma membrane	55.2	54.95
VIT_12s0035g00920.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	57.92	53.56
GSMUA_Achr7P23290_001	Banana	endoplasmic reticulum	52.49	53.21
PGSC0003DMT400064047	Potato	plasma membrane	53.85	52.19
Os08t0106501-01	Rice	plastid	49.77	49.11
TraesCS7D01G320400.1	Wheat	plastid	47.96	46.29
TraesCS7A01G324500.1	Wheat	plastid	47.06	45.81
TraesCS7B01G225000.1	Wheat	plastid	46.61	45.37
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.08	43.46
HORVU7Hr1G077620.2	Barley	plastid	47.51	43.21
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.63	41.07
Zm00001d034995_P001	Maize	plastid	43.44	40.85
Bra024198.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane, plastid	36.2	40.0
Bra025039.1-P	Field mustard	plasma membrane	38.91	39.63
Bra011032.1-P	Field mustard	plasma membrane	35.29	39.0
EES14365	Sorghum	cytosol, endoplasmic reticulum, mitochondrion, plastid	43.89	38.8
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.08	38.59
Bra031289.1-P	Field mustard	plasma membrane	32.13	38.38
Bra023874.1-P	Field mustard	plasma membrane	30.77	36.76
Bra023875.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	33.03	36.14
Bra006030.1-P	Field mustard	plasma membrane	30.32	35.45
Bra031287.1-P	Field mustard	plasma membrane	32.13	34.8
Bra025657.1-P	Field mustard	plastid	34.39	31.15

Protein Annotations

EnsemblPlants:Bra021460.1	EnsemblPlants:Bra021460.1-P	EnsemblPlantsGene:Bra021460	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF10	PFAM:PF05078	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002544912	UniProt:M4DY64	MapMan:35.1	:	:	:

Description

AT3G02430 (E=9e-099) | unknown protein

Coordinates

chrA01:+:25135065..25135730

Molecular Weight (calculated)

24270.3 Da

IEP (calculated)

8.311

GRAVY (calculated)

0.209

Length

221 amino acids

Sequence
(BLAST)

001: MSALKLRNAN FPAPEIDDLS KQLSSDRQPL VLKRQRSVSQ RAMSNTLTSA ANLSNLLPTG TLLAFQLLTP VFTSNGVCDH ATRFLTAGLL FLLAASCFIS
101: SFTDSVKADN GTVYYGFVTF NGMWVVDYAD PSGLGLPDLS KYRMRFVDWI HATLSVLVFG AVALRDKYVT DCFYPSPEEE TKHVLDIVPV GIGVICSLLF
201: TVFPTRRLGI GYLVTGNGDR R

Best Arabidopsis Sequence Match ( AT3G02430.1 )
(BLAST)

001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR

Arabidopsis Description

DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.